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SYDE1 synapse defective Rho GTPase homolog 1 [ Gallus gallus (chicken) ]

Gene ID: 429892, updated on 5-Mar-2024

Summary

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Symbol
SYDE1provided by CGNC
Full Name
synapse defective Rho GTPase homolog 1provided by CGNC
Primary source
CGNC:53800
See related
Ensembl:ENSGALG00010003479
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 30
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 30 NC_052561.1 (201691..209673, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 30 Unlocalized Scaffold NW_024096184.1 (173788..181662)

Chromosome 30 - NC_052561.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112530991 Neighboring gene ilvB acetolactate synthase like Neighboring gene MAPK-interacting and spindle-stabilizing protein-like Neighboring gene macrophage mannose receptor 1-like Neighboring gene uncharacterized LOC121107796 Neighboring gene patatin like phospholipase domain containing 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein SYDE1; synapse defective Rho GTPase homolog 1
Names
rho GTPase-activating protein SYDE1-like
synapse defective 1, Rho GTPase, homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052561.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    201691..209673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025145753.3 → XP_025001521.1  rho GTPase-activating protein SYDE1

    UniProtKB/TrEMBL
    A0A3Q2UAW2
    Related
    ENSGALP00010004841.1, ENSGALT00010008084.1
    Conserved Domains (1) summary
    cl02570
    Location:491 → 702
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NW_024096184.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    173788..181662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046937520.1 → XP_046793476.1  rho GTPase-activating protein SYDE1

Nucleotide Protein
Heading Accession and Version

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