Format

Send to:

Choose Destination

Tbx3os2 T-box 3, opposite strand 2 [ Mus musculus (house mouse) ]

Gene ID: 433944, updated on 23-Jun-2021

Summary

Official Symbol
Tbx3os2provided by MGI
Official Full Name
T-box 3, opposite strand 2provided by MGI
Primary source
MGI:MGI:3801954
See related
Ensembl:ENSMUSG00000086847
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm16065
Expression
Biased expression in bladder adult (RPKM 2.9), large intestine adult (RPKM 1.3) and 6 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Tbx3os2 in Genome Data Viewer
Location:
5; 5 F
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (119823153..119829283, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (119685088..119691218, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene T-box 3, opposite strand 1 Neighboring gene enhancer eA upstream of Tbx3 Neighboring gene predicted gene 16064 Neighboring gene T-box 3 Neighboring gene predicted gene, 42017 Neighboring gene T-box 5 Neighboring gene predicted gene 5563

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Tbx3 oppopsite strand transcript 2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040416.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC140675, AK083542
    Related
    ENSMUST00000135385.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    119823153..119829283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center