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LOC4340725 aldehyde dehydrogenase family 2 member B7, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340725, updated on 2-Mar-2021

Summary

Gene symbol
LOC4340725
Gene description
aldehyde dehydrogenase family 2 member B7, mitochondrial
Locus tag
OSNPB_060270900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
Aldh2b
Expression
Broad expression in roots after flowering (RPKM 715.2), leaves after flowering (RPKM 658.6) and 5 other tissues See more
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Genomic context

See LOC4340725 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (9091021..9096497)

Chromosome 6 - NC_029261.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4340723 Neighboring gene potassium transporter 24 Neighboring gene UDP-glycosyltransferase 90A2 Neighboring gene probable amidase At4g34880

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029261.1 Chromosome 6 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
aldehyde dehydrogenase family 2 member B7, mitochondrial
Names
OSJNBa0084K06.38
Os06g0270900
aldehyde dehydrogenase ALDH2b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029261.1 Reference IRGSP-1.0 Primary Assembly

    Range
    9091021..9096497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015787848.2XP_015643334.1  aldehyde dehydrogenase family 2 member B7, mitochondrial

    UniProtKB/TrEMBL
    Q9FRX7
    Conserved Domains (1) summary
    PLN02466
    Location:33549
    PLN02466; aldehyde dehydrogenase family 2 member
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