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Gpr62 G protein-coupled receptor 62 [ Mus musculus (house mouse) ]

Gene ID: 436090, updated on 23-Jun-2021

Summary

Official Symbol
Gpr62provided by MGI
Official Full Name
G protein-coupled receptor 62provided by MGI
Primary source
MGI:MGI:3525078
See related
Ensembl:ENSMUSG00000091735
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933402E03Rik
Expression
Broad expression in testis adult (RPKM 15.3), cerebellum adult (RPKM 7.8) and 15 other tissues See more
Orthologs
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Genomic context

See Gpr62 in Genome Data Viewer
Location:
9; 9 F1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (106341161..106343184, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (106463962..106465985, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (106366291..106368271, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene aminoacylase 1 Neighboring gene abhydrolase domain containing 14A Neighboring gene abhydrolase domain containing 14b Neighboring gene poly(rC) binding protein 4 Neighboring gene poly (ADP-ribose) polymerase family, member 3 Neighboring gene ribosomal RNA processing 9, U3 small nucleolar RNA binding protein

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables arrestin family protein binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in endosome ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
G-protein coupled receptor 62
Names
G protein-coupled receptor 61 pseudogene
G protein-coupled receptor GPR62
probable G-protein coupled receptor 62

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001159652.2NP_001153124.1  G-protein coupled receptor 62

    See identical proteins and their annotated locations for NP_001153124.1

    Status: VALIDATED

    Source sequence(s)
    AC151729
    Consensus CDS
    CCDS52909.1
    UniProtKB/Swiss-Prot
    Q80UC6
    Related
    ENSMUSP00000129055.2, ENSMUST00000164834.3
    Conserved Domains (2) summary
    cd14964
    Location:1741
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:16297
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    106341161..106343184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_020924.1: Suppressed sequence

    Description
    NG_020924.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
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