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CG11317 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43676, updated on 10-May-2024

Summary

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Official Symbol
CG11317provided by FlyBase
Primary source
FLYBASE:FBgn0039816
Locus tag
Dmel_CG11317
See related
AllianceGenome:FB:FBgn0039816
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG11317
Summary
Is expressed in embryonic brain; larval ventral nerve cord; and lateral cord neurons. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See CG11317 in Genome Data Viewer
Location:
100B2-100B2; 3-102 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31090712..31097321, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (26916434..26923043, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene discs overgrown Neighboring gene Sox100B Neighboring gene uncharacterized protein Neighboring gene mayo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sox100B, a Drosophila group E Sox-domain gene, is required for somatic testis differentiation. Nanda S, et al. Sex Dev, 2009. PMID 19339815, Free PMC Article
  2. Combining Developmental and Perturbation-Seq Uncovers Transcriptional Modules Orchestrating Neuronal Remodeling. Alyagor I, et al. Dev Cell, 2018 Oct 8. PMID 30300589, Free PMC Article
  3. A large-scale resource for tissue-specific CRISPR mutagenesis in Drosophila. Port F, et al. Elife, 2020 Feb 13. PMID 32053108, Free PMC Article
  4. A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages. Corrales M, et al. Neural Dev, 2022 Aug 24. PMID 36002881, Free PMC Article
  5. Cellular diversity in the Drosophila midbrain revealed by single-cell transcriptomics. Croset V, et al. Elife, 2018 Apr 19. PMID 29671739, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG11317-PA
CG11317-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    31090712..31097321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143583.4 → NP_651840.1  uncharacterized protein Dmel_CG11317, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651840.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TC6, Q9VA15
    Related
    FBpp0085103
    Conserved Domains (1) summary
    sd00017
    Location:207 → 224
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. NM_001276204.1 → NP_001263133.1  uncharacterized protein Dmel_CG11317, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001263133.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KI67
    Conserved Domains (1) summary
    sd00017
    Location:210 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KI67 A0A0B4KI67
Q9VA15 Q9VA15

Gene LinkOut

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