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RpS3A Ribosomal protein S3A [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43768, updated on 4-Apr-2024

Summary

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Official Symbol
RpS3Aprovided by FlyBase
Official Full Name
Ribosomal protein S3Aprovided by FlyBase
Primary source
FLYBASE:FBgn0017545
Locus tag
Dmel_CG2168
See related
AllianceGenome:FB:FBgn0017545
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:Liang-2.29; C3; CG2168; chr4:86830..87021; chr4:87101..87234; chr4:87503..87595; clone 2.29; Dmel\CG2168; l(4)102ABa; M(4)101; M(4)57g; M(4)[57g]; M57g; M[57g]; Rps3A; RpS3a; RPS3a; RPS3A; Rsp3A; S1e
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; organism; and ovary. Used to study intrinsic cardiomyopathy. Orthologous to human RPS3A (ribosomal protein S3A). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
101F1-101F1; 4-0 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (65225..67207, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (85851..87833, complement)

Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44440 Neighboring gene antisense RNA:CR43957 Neighboring gene cubitus interruptus Neighboring gene ncRNA Neighboring gene pangolin Neighboring gene Ankyrin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosomal position effects reveal different cis-acting requirements for rDNA transcription and sex chromosome pairing in Drosophila melanogaster. Briscoe A Jr, et al. Genetics, 2000 Jul. PMID 10880481, Free PMC Article
  2. Drosophila RpS3a, a novel Minute gene situated between the segment polarity genescubitus interruptus and dTCF. van Beest M, et al. Nucleic Acids Res, 1998 Oct 1. PMID 9742251, Free PMC Article
  3. Antisense suppression of the putative ribosomal protein S3A gene disrupts ovarian development in Drosophila melanogaster. Reynaud E, et al. Mol Gen Genet, 1997 Oct. PMID 9393444
  4. Analysis of two cosmid clones from chromosome 4 of Drosophila melanogaster reveals two new genes amid an unusual arrangement of repeated sequences. Locke J, et al. Genome Res, 1999 Feb. PMID 10022978, Free PMC Article
  5. Genetic organization of the ci-M-pan region on chromosome IV in Drosophila melanogaster. Kronhamn J, et al. Genome, 1999 Dec. PMID 10659782

See all (85) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic small ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein S3A
Names
CG2168-PA
CG2168-PB
CG2168-PF
Minute(4)101
RpS3A-PA
RpS3A-PB
RpS3A-PF
clone 3
ribosomal protein S3a
ribosomal protein S3alpha

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004353.4 Reference assembly

    Range
    65225..67207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001258475.2 → NP_001245404.1  ribosomal protein S3A, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245404.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C4IXY1, E4NKK4, H0RNB6, H9XVL9, O44389, P55830, Q8IMA9, Q8IMB0, Q8SZD2, Q9V4A9
    Conserved Domains (1) summary
    pfam01015
    Location:21 → 224
    Ribosomal_S3Ae; Ribosomal S3Ae family

  2. NM_166714.4 → NP_726518.1  ribosomal protein S3A, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726518.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P55830
    Related
    FBpp0088243
    Conserved Domains (1) summary
    pfam01015
    Location:14 → 174
    Ribosomal_S3Ae; Ribosomal S3Ae family

  3. NM_079879.4 → NP_524618.1  ribosomal protein S3A, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524618.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C4IXY1, E4NKK4, H0RNB6, H9XVL9, O44389, P55830, Q8IMA9, Q8IMB0, Q8SZD2, Q9V4A9
    Related
    FBpp0088242
    Conserved Domains (1) summary
    pfam01015
    Location:21 → 224
    Ribosomal_S3Ae; Ribosomal S3Ae family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
4V6W_AB.1
P55830.4 P55830

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