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LINC02483 long intergenic non-protein coding RNA 2483 [ Homo sapiens (human) ]

Gene ID: 441025, updated on 10-Oct-2023

Summary

Official Symbol
LINC02483provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2483provided by HGNC
Primary source
HGNC:HGNC:53457
See related
Ensembl:ENSG00000251383 AllianceGenome:HGNC:53457
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
4q21.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (75354076..75362566)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (78694225..78702712)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (76279286..76287776)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2562 Neighboring gene Sharpr-MPRA regulatory region 9565 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:76052289-76052985 Neighboring gene uncharacterized LOC100506253 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:76106257-76106757 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21616 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:76201500-76202127 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:76238240-76239439 Neighboring gene NANOG hESC enhancer GRCh37_chr4:76254685-76255186 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:76326102-76326687 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:76326688-76327272 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:76372915-76373483 Neighboring gene uncharacterized LOC107986230 Neighboring gene H3K27ac hESC enhancers GRCh37_chr4:76438722-76439652 and GRCh37_chr4:76439653-76440583 Neighboring gene ring finger and CHY zinc finger domain containing 1 Neighboring gene THAP domain containing 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033964.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC039667
    Related
    ENST00000512043.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    75354076..75362566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    78694225..78702712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)