U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sec61a1 Sec61 translocon alpha 1 subunit [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448033, updated on 5-Mar-2024

Summary

Official Symbol
sec61a1provided by Xenbase
Official Full Name
Sec61 translocon alpha 1 subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-971480
See related
Ensembl:ENSXETG00000024743
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
sec61; sec61a; sec61alpha
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (134943805..134952707)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (124438284..124447159)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB (POZ) domain containing 12 Neighboring gene U4 spliceosomal RNA Neighboring gene RuvB like AAA ATPase 1 Neighboring gene eukaryotic elongation factor, selenocysteine-tRNA-specific

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein transport protein Sec61 subunit alpha isoform 1
Names
Sec61 alpha 1 subunit

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004801.2NP_001004801.1  protein transport protein Sec61 subunit alpha isoform 1

    See identical proteins and their annotated locations for NP_001004801.1

    Status: PROVISIONAL

    Source sequence(s)
    CR848298
    UniProtKB/TrEMBL
    F7DVK5, Q6GLE4
    Related
    ENSXETP00000061874.1, ENSXETT00000061328.3
    Conserved Domains (1) summary
    PTZ00219
    Location:1471
    PTZ00219; Sec61 alpha subunit; Provisional

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    134943805..134952707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)