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ephx2 epoxide hydrolase 2, cytoplasmic [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448759, updated on 5-Mar-2024

Summary

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Official Symbol
ephx2provided by Xenbase
Official Full Name
epoxide hydrolase 2, cytoplasmicprovided by Xenbase
Primary source
Xenbase:XB-GENE-947544
See related
Ensembl:ENSXETG00000017581
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
sEH
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (153547389..153602850)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (146082087..146132899, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene cholinergic receptor, nicotinic alpha 2 Neighboring gene uncharacterized LOC100496183 Neighboring gene L-gulonolactone oxidase Neighboring gene uncharacterized LOC101732065

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC89079

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables epoxide hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
bifunctional epoxide hydrolase 2
Names
soluble epoxide hydrolase
NP_001006912.1
XP_012819488.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006911.1 → NP_001006912.1  bifunctional epoxide hydrolase 2

    See identical proteins and their annotated locations for NP_001006912.1

    Status: PROVISIONAL

    Source sequence(s)
    BC075370
    UniProtKB/TrEMBL
    A0A6I8QZP4, F6PS50, F6XZV3, Q6DJ15
    Related
    ENSXETP00000079072.2, ENSXETT00000068045.2
    Conserved Domains (2) summary
    pfam00561
    Location:260 → 537
    Abhydrolase_1; alpha/beta hydrolase fold
    cd02603
    Location:5 → 215
    HAD_sEH-N_like; N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    153547389..153602850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964034.3 → XP_012819488.2  bifunctional epoxide hydrolase 2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RK06, A0A8J0SNP7
    Related
    ENSXETP00000082208.2, ENSXETT00000088761.2
    Conserved Domains (2) summary
    cd02603
    Location:5 → 215
    HAD_sEH-N_like; N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive
    pfam00561
    Location:260 → 536
    Abhydrolase_1; alpha/beta hydrolase fold
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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