POLR3A RNA polymerase III subunit A [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: POLR3Aprovided by VGNC
Official Full Name: RNA polymerase III subunit Aprovided by VGNC
Primary source: VGNC:VGNC:8884
Locus tag: CK820_G0007768
See related: Ensembl:ENSPTRG00000002664
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 33

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	8	NC_072406.2 (90192108..90249235, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	10	NC_072408.1 (80812089..80867058, complement)

Chromosome 8 - NC_072406.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D8S2279 (e-PCR)
- UniSTS:473907

D16S325 (e-PCR)
- UniSTS:147089

RPC155_3541 (e-PCR)
- UniSTS:462499

STS-AA033874 (e-PCR)
- UniSTS:56020

STS-T70096 (e-PCR)
- UniSTS:22493

RH120039 (e-PCR)
- UniSTS:133363

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase III activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in DNA-templated transcription	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of RNA polymerase III complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: DNA-directed RNA polymerase III subunit RPC1

Names: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa; polymerase (RNA) III subunit A

XP_016774210.1

EC 2.7.7.6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

90192108..90249235 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016918721.4 → XP_016774210.1 DNA-directed RNA polymerase III subunit RPC1

UniProtKB/TrEMBL

A0A2J8NTX4, A0A6D2XLW2, H2Q251, K7D6W6

Related

ENSPTRP00000091884.1

Conserved Domains (3) summary

cd02736
Location:1021 → 1360

RNAP_III_Rpc1_C; Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain

cd02583
Location:24 → 891

RNAP_III_RPC1_N; Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain

cl25425
Location:841 → 1058

RNAP_largest_subunit_C; Largest subunit of RNA polymerase (RNAP), C-terminal domain