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CALML4 calmodulin like 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 453534, updated on 29-Mar-2024

Summary

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Official Symbol
CALML4provided by VGNC
Official Full Name
calmodulin like 4provided by VGNC
Primary source
VGNC:VGNC:6445
See related
Ensembl:ENSPTRG00000007211
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (60186204..60199329, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (60161058..60174183, complement)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene SKI family transcriptional corepressor 1 Neighboring gene U6 spliceosomal RNA Neighboring gene protein inhibitor of activated STAT 1 Neighboring gene small ribosomal subunit protein uS8-like Neighboring gene uncharacterized LOC134808550 Neighboring gene uncharacterized LOC107968650 Neighboring gene CLN6 transmembrane ER protein Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    60186204..60199329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_510500.8 → XP_510500.3  calmodulin-like protein 4 isoform X1

    UniProtKB/TrEMBL
    H2RD18
    Related
    ENSPTRP00000058195.1
    Conserved Domains (2) summary
    PTZ00184
    Location:44 → 186
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:55 → 117
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_009429430.5 → XP_009427705.1  calmodulin-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_009427705.1

    Conserved Domains (1) summary
    PTZ00184
    Location:1 → 71
    PTZ00184; calmodulin; Provisional

  3. XM_009429429.5 → XP_009427704.1  calmodulin-like protein 4 isoform X3

    See identical proteins and their annotated locations for XP_009427704.1

    Conserved Domains (1) summary
    PTZ00184
    Location:4 → 110
    PTZ00184; calmodulin; Provisional

  4. XM_003314729.7 → XP_003314777.1  calmodulin-like protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A2I3RGR6
    Related
    ENSPTRP00000063578.1
    Conserved Domains (1) summary
    cd00051
    Location:90 → 140
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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