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NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic [ Pan troglodytes (chimpanzee) ]

Gene ID: 453912, updated on 29-Mar-2024

Summary

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Official Symbol
NUBP1provided by VGNC
Official Full Name
NUBP iron-sulfur cluster assembly factor 1, cytosolicprovided by VGNC
Primary source
VGNC:VGNC:5854
Locus tag
CK820_G0031168
See related
Ensembl:ENSPTRG00000007758
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (13389048..13414233)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (13389062..13414235)

Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107968788 Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like Neighboring gene ATP synthase subunit a-like Neighboring gene trans-golgi network vesicle protein 23 homolog A Neighboring gene rho GTPase-activating protein 21-like Neighboring gene class II major histocompatibility complex transactivator Neighboring gene Dexi homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic Fe-S cluster assembly factor NUBP1
Names
nucleotide binding protein 1 (MinD homolog, E. coli)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    13389048..13414233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016929394.3 → XP_016784883.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8L9Z0, A0A2J8L9Z8, A0A6D2W8C1, A0A6D2XQP0, H2QAK2, K7A5Q1
    Related
    ENSPTRP00000089170.1
    Conserved Domains (1) summary
    pfam10609
    Location:53 → 303
    ParA; NUBPL iron-transfer P-loop NTPase

  2. XM_001139497.7 → XP_001139497.3  cytosolic Fe-S cluster assembly factor NUBP1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8L9Z0, A0A6D2W8C1, H2QAK2
    Conserved Domains (1) summary
    pfam10609
    Location:53 → 273
    ParA; NUBPL iron-transfer P-loop NTPase

  3. XM_063797667.1 → XP_063653737.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X1

  4. XM_063797668.1 → XP_063653738.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X3

  5. XM_016929397.3 → XP_016784886.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X5

    Conserved Domains (1) summary
    cl21455
    Location:53 → 239
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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