Format

Send to:

Choose Destination

PDXDC1 pyridoxal dependent decarboxylase domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 453941, updated on 19-Mar-2021

Summary

Gene symbol
PDXDC1
Gene description
pyridoxal dependent decarboxylase domain containing 1
Locus tag
CK820_G0055659
See related
Ensembl:ENSPTRG00000007799 Ensembl:ENSPTRG00000051138
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
PDXDC2; PDXDC2P
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PDXDC1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
31
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 16 NC_036895.1 (15113435..15180846, complement)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 16 NC_006483.4 (15220455..15286372)

Chromosome 16 - NC_036895.1Genomic Context describing neighboring genes Neighboring gene nuclear pore complex-interacting protein family member B13-like Neighboring gene U4 spliceosomal RNA Neighboring gene RRN3 homolog, RNA polymerase I transcription factor Neighboring gene N-terminal asparagine amidase Neighboring gene uncharacterized protein KIAA2013 pseudogene Neighboring gene nuclear pore complex-interacting protein family member A2 Neighboring gene group 10 secretory phospholipase A2-like

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
pyridoxal-dependent decarboxylase domain-containing protein 1
Names
putative pyridoxal-dependent decarboxylase domain-containing protein 2
pyridoxal-dependent decarboxylase domain containing 2
XP_016784951.2
XP_016784952.2
XP_016784953.2
XP_016784954.2
XP_016784955.2
XP_016784956.2
XP_016784957.2
XP_016784958.2
XP_016784959.2
XP_016784960.2
XP_016784961.2
XP_016784962.2
XP_016784963.2
XP_024205542.1
XP_024205543.1
XP_024205544.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036895.1 Reference Clint_PTRv2 Primary Assembly

    Range
    15113435..15180846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016929465.2XP_016784954.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X4

    Conserved Domains (2) summary
    cl18945
    Location:190412
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:361502
    Aminotran_5; Aminotransferase class-V
  2. XM_016929462.2XP_016784951.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X1

    Conserved Domains (2) summary
    cl18945
    Location:190412
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:361502
    Aminotran_5; Aminotransferase class-V
  3. XM_016929467.2XP_016784956.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X6

    Conserved Domains (2) summary
    cl18945
    Location:163385
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:334475
    Aminotran_5; Aminotransferase class-V
  4. XM_016929466.2XP_016784955.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X5

    Conserved Domains (2) summary
    cl18945
    Location:172394
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:343484
    Aminotran_5; Aminotransferase class-V
  5. XM_016929471.2XP_016784960.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X10

    Conserved Domains (2) summary
    cl18945
    Location:145367
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:316457
    Aminotran_5; Aminotransferase class-V
  6. XM_016929473.2XP_016784962.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X12

    Conserved Domains (2) summary
    cl18945
    Location:115337
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:286427
    Aminotran_5; Aminotransferase class-V
  7. XM_016929463.2XP_016784952.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    cl18945
    Location:186408
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:357498
    Aminotran_5; Aminotransferase class-V
  8. XM_016929464.2XP_016784953.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X3

    Conserved Domains (2) summary
    cl18945
    Location:181403
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:352493
    Aminotran_5; Aminotransferase class-V
  9. XM_024349776.1XP_024205544.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X12

    Conserved Domains (2) summary
    cl18945
    Location:115337
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:286427
    Aminotran_5; Aminotransferase class-V
  10. XM_016929469.2XP_016784958.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X8

    Conserved Domains (2) summary
    cl18945
    Location:157379
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:328469
    Aminotran_5; Aminotransferase class-V
  11. XM_016929470.2XP_016784959.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X8

    Conserved Domains (2) summary
    cl18945
    Location:157379
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:328469
    Aminotran_5; Aminotransferase class-V
  12. XM_024349774.1XP_024205542.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X8

    Conserved Domains (2) summary
    cl18945
    Location:157379
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:328469
    Aminotran_5; Aminotransferase class-V
  13. XM_016929472.2XP_016784961.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X11

    Conserved Domains (2) summary
    cl18945
    Location:145367
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:316457
    Aminotran_5; Aminotransferase class-V
  14. XM_016929468.2XP_016784957.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X7

    Conserved Domains (2) summary
    cl18945
    Location:172394
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:343484
    Aminotran_5; Aminotransferase class-V
  15. XM_024349775.1XP_024205543.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X9

    Conserved Domains (2) summary
    cl18945
    Location:130352
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:301442
    Aminotran_5; Aminotransferase class-V
  16. XM_016929474.2XP_016784963.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X13

    Conserved Domains (2) summary
    cl18945
    Location:190412
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    cl28159
    Location:361502
    Aminotran_5; Aminotransferase class-V
Support Center