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CTSA cathepsin A [ Pan troglodytes (chimpanzee) ]

Gene ID: 458290, updated on 29-Mar-2024

Summary

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Official Symbol
CTSAprovided by VGNC
Official Full Name
cathepsin Aprovided by VGNC
Primary source
VGNC:VGNC:57964
Locus tag
CK820_G0019968
See related
Ensembl:ENSPTRG00000048132
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (52157596..52165292)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (52213260..52220784)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 25 Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene phospholipid transfer protein Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene zinc finger protein 335 Neighboring gene ferritin light chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal protective protein
XP_016793503.1
XP_016793504.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    52157596..52165292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016938014.4 → XP_016793503.1  lysosomal protective protein isoform X1

    UniProtKB/TrEMBL
    A0A2I3SD70, A0A2J8MJV1, A0A6D2XKV6, K7APT9
    Related
    ENSPTRP00000091522.1
    Conserved Domains (1) summary
    pfam00450
    Location:54 → 491
    Peptidase_S10; Serine carboxypeptidase

  2. XM_016938015.3 → XP_016793504.1  lysosomal protective protein isoform X2

    UniProtKB/TrEMBL
    A0A2I3SD70, A0A2J8MJV5, A0A6D2XZG0, K7AVN6
    Related
    ENSPTRP00000072218.1
    Conserved Domains (1) summary
    pfam00450
    Location:54 → 474
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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