U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZRANB3 zinc finger RANBP2-type containing 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459629, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
ZRANB3provided by VGNC
Official Full Name
zinc finger RANBP2-type containing 3provided by VGNC
Primary source
VGNC:VGNC:14168
Locus tag
CK820_G0001076
See related
Ensembl:ENSPTRG00000012492
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2B
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (37230904..37562357, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (37230897..37562322, complement)

Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene RAB3 GTPase activating protein catalytic subunit 1 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene uncharacterized LOC129143404 Neighboring gene ras GTPase-activating protein-binding protein 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene R3H domain containing 1 Neighboring gene microRNA mir-128-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA annealing helicase and endonuclease ZRANB3
Names
zinc finger RAN-binding domain-containing protein 3
zinc finger, RAN-binding domain containing 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    37230904..37562357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054679794.2 → XP_054535769.1  DNA annealing helicase and endonuclease ZRANB3 isoform X5

  2. XM_016949745.4 → XP_016805234.2  DNA annealing helicase and endonuclease ZRANB3 isoform X2

    UniProtKB/TrEMBL
    H2QIR6, K7CTK4
    Conserved Domains (4) summary
    COG0553
    Location:22 → 503
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:1036 → 1074
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:652 → 671
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:652 → 674
    zf-RanBP; Zn-finger in Ran binding protein and others

  3. XM_016949744.4 → XP_016805233.2  DNA annealing helicase and endonuclease ZRANB3 isoform X1

    UniProtKB/TrEMBL
    H2QIR6, K7CTK4
    Conserved Domains (4) summary
    COG0553
    Location:22 → 503
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:1038 → 1076
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:652 → 671
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:652 → 674
    zf-RanBP; Zn-finger in Ran binding protein and others

  4. XM_063791135.1 → XP_063647205.1  DNA annealing helicase and endonuclease ZRANB3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PNY8, A0A8I3B225, K7A5A9, K7CNZ1

  5. XM_063791146.1 → XP_063647216.1  DNA annealing helicase and endonuclease ZRANB3 isoform X9

  6. XM_063791145.1 → XP_063647215.1  DNA annealing helicase and endonuclease ZRANB3 isoform X8

  7. XM_016949751.4 → XP_016805240.2  DNA annealing helicase and endonuclease ZRANB3 isoform X7

    UniProtKB/TrEMBL
    A0A2I3SST1
    Conserved Domains (4) summary
    COG0553
    Location:1 → 416
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:951 → 989
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:565 → 584
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:565 → 587
    zf-RanBP; Zn-finger in Ran binding protein and others

  8. XM_063791141.1 → XP_063647211.1  DNA annealing helicase and endonuclease ZRANB3 isoform X6

  9. XM_063791138.1 → XP_063647208.1  DNA annealing helicase and endonuclease ZRANB3 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PNX9

  10. XM_063791150.1 → XP_063647220.1  DNA annealing helicase and endonuclease ZRANB3 isoform X10

  11. XM_063791144.1 → XP_063647214.1  DNA annealing helicase and endonuclease ZRANB3 isoform X7

  12. XM_063791148.1 → XP_063647218.1  DNA annealing helicase and endonuclease ZRANB3 isoform X10

  13. XM_063791149.1 → XP_063647219.1  DNA annealing helicase and endonuclease ZRANB3 isoform X10

  14. XM_063791142.1 → XP_063647212.1  DNA annealing helicase and endonuclease ZRANB3 isoform X7

  15. XM_063791139.1 → XP_063647209.1  DNA annealing helicase and endonuclease ZRANB3 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PNX9

  16. XM_063791136.1 → XP_063647206.1  DNA annealing helicase and endonuclease ZRANB3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PNY8, A0A8I3B225, K7A5A9, K7CNZ1

  17. XM_016949749.4 → XP_016805238.2  DNA annealing helicase and endonuclease ZRANB3 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PNX9, H2QIR6, K7CTK4
    Conserved Domains (4) summary
    COG0553
    Location:6 → 476
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:1009 → 1047
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:625 → 644
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:625 → 647
    zf-RanBP; Zn-finger in Ran binding protein and others

  18. XM_016949747.4 → XP_016805236.2  DNA annealing helicase and endonuclease ZRANB3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PNY8, A0A8I3B225, H2QIR6, K7A5A9, K7CNZ1, K7CTK4
    Conserved Domains (4) summary
    COG0553
    Location:6 → 476
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:1011 → 1049
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:625 → 644
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:625 → 647
    zf-RanBP; Zn-finger in Ran binding protein and others

  19. XM_063791140.1 → XP_063647210.1  DNA annealing helicase and endonuclease ZRANB3 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PNX9

  20. XM_063791137.1 → XP_063647207.1  DNA annealing helicase and endonuclease ZRANB3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PNY8, A0A8I3B225, K7A5A9, K7CNZ1

  21. XM_063791143.1 → XP_063647213.1  DNA annealing helicase and endonuclease ZRANB3 isoform X7

  22. XM_063791147.1 → XP_063647217.1  DNA annealing helicase and endonuclease ZRANB3 isoform X10

  23. XM_063791151.1 → XP_063647221.1  DNA annealing helicase and endonuclease ZRANB3 isoform X10

  24. XM_016949752.4 → XP_016805241.2  DNA annealing helicase and endonuclease ZRANB3 isoform X10

    UniProtKB/TrEMBL
    A0A2I3SST1
    Conserved Domains (4) summary
    COG0553
    Location:79 → 224
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd00085
    Location:759 → 797
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
    sd00029
    Location:373 → 392
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:373 → 395
    zf-RanBP; Zn-finger in Ran binding protein and others
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.