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TF transferrin [ Pan troglodytes (chimpanzee) ]

Gene ID: 460710, updated on 29-Mar-2024

Summary

Official Symbol
TFprovided by VGNC
Official Full Name
transferrinprovided by VGNC
Primary source
VGNC:VGNC:12236
Locus tag
CK820_G0030020
See related
Ensembl:ENSPTRG00000015412
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
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Genomic context

Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (136993933..137024992)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (136903299..136934358)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase II binding protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene serotransferrin Neighboring gene fatty acid CoA ligase Acsl3-like Neighboring gene SRP receptor subunit beta Neighboring gene RAB6B, member RAS oncogene family

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in antibacterial humoral response IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
serotransferrin
Names
Beta-1-metal-binding globulin
Siderophilin
beta-1 metal-binding globulin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001144835.1NP_001138307.1  serotransferrin precursor

    See identical proteins and their annotated locations for NP_001138307.1

    Status: PROVISIONAL

    Source sequence(s)
    AB222114
    UniProtKB/Swiss-Prot
    A5A6I6
    UniProtKB/TrEMBL
    A0A2J8QIU6, A0A2J8QIW6
    Related
    ENSPTRP00000026561.4, ENSPTRT00000028781.5
    Conserved Domains (2) summary
    cd13617
    Location:358682
    PBP2_transferrin_C; The C-lobe of transferrin, a member of the type 2 periplasmic binding protein fold superfamily
    cd13618
    Location:24346
    PBP2_transferrin_N; The N-lobe of transferrin, a member of the type 2 periplasmic binding protein fold superfamily

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    136993933..137024992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)