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HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462329, updated on 3-Apr-2024

Summary

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Gene symbol
HNRNPH1
Gene description
heterogeneous nuclear ribonucleoprotein H1
Locus tag
CK820_G0044510
See related
Ensembl:ENSPTRG00000051626
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
HNRPH1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (177076221..177086696, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (177098219..177109538, complement)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C5orf60-like Neighboring gene RUN and FYVE domain containing 1 Neighboring gene peroxiredoxin-2-like Neighboring gene uncharacterized protein C5orf60 Neighboring gene uncharacterized LOC107974953

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein H
Names
heterogeneous nuclear ribonucleoprotein H1 (H)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    177076221..177086696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054684847.2 → XP_054540822.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    UniProtKB/TrEMBL
    A0A2I3SHY4, A0A2J8JTN0, A0A6D2WCS2

  2. XM_009450306.5 → XP_009448581.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    See identical proteins and their annotated locations for XP_009448581.1

    UniProtKB/TrEMBL
    A0A2I3TX17, A0A2J8JTQ8, A0A6D2XBG6, K7BB57
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  3. XM_063810981.1 → XP_063667051.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    UniProtKB/TrEMBL
    A0A2I3SHY4, A0A2J8JTN0, A0A6D2WCS2

  4. XM_054684846.2 → XP_054540821.1  heterogeneous nuclear ribonucleoprotein H isoform X2

  5. XM_063810987.1 → XP_063667057.1  heterogeneous nuclear ribonucleoprotein H isoform X5

  6. XM_054684844.2 → XP_054540819.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    UniProtKB/TrEMBL
    A0A2I3TX17, A0A2J8JTQ8, A0A6D2XBG6

  7. XM_063810988.1 → XP_063667058.1  heterogeneous nuclear ribonucleoprotein H isoform X6

  8. XM_016954425.3 → XP_016809914.1  heterogeneous nuclear ribonucleoprotein H isoform X2

    UniProtKB/TrEMBL
    A0A2I3TP46
    Related
    ENSPTRP00000091011.1
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  9. XM_016954428.4 → XP_016809917.1  heterogeneous nuclear ribonucleoprotein H isoform X4

    UniProtKB/TrEMBL
    A0A2I3S1J7, A0A2I3TP46, A0A2J8JTP1, A0A6D2XG40
    Related
    ENSPTRP00000070818.1
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  10. XM_063810986.1 → XP_063667056.1  heterogeneous nuclear ribonucleoprotein H isoform X5

  11. XM_016954427.4 → XP_016809916.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    UniProtKB/TrEMBL
    A0A2I3SHY4, A0A2J8JTN0, A0A6D2WCS2, K7BB57
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  12. XM_063810983.1 → XP_063667053.1  heterogeneous nuclear ribonucleoprotein H isoform X4

    UniProtKB/TrEMBL
    A0A2I3S1J7, A0A2J8JTP1, A0A6D2XG40

  13. XM_024356870.3 → XP_024212638.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    UniProtKB/TrEMBL
    A0A2I3TX17, A0A2J8JTQ8, A0A6D2XBG6, K7BB57
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  14. XM_063810982.1 → XP_063667052.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    UniProtKB/TrEMBL
    A0A2I3SHY4, A0A2J8JTN0, A0A6D2WCS2

  15. XM_016954423.4 → XP_016809912.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    UniProtKB/TrEMBL
    A0A2I3TX17, A0A2J8JTQ8, A0A6D2XBG6, K7BB57
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  16. XM_054684845.2 → XP_054540820.1  heterogeneous nuclear ribonucleoprotein H isoform X2

  17. XM_024356872.3 → XP_024212640.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    UniProtKB/TrEMBL
    A0A2I3SHY4, A0A2J8JTN0, A0A6D2WCS2, K7BB57
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  18. XM_063810985.1 → XP_063667055.1  heterogeneous nuclear ribonucleoprotein H isoform X5

  19. XM_063810989.1 → XP_063667059.1  heterogeneous nuclear ribonucleoprotein H isoform X6

  20. XM_063810984.1 → XP_063667054.1  heterogeneous nuclear ribonucleoprotein H isoform X4

    UniProtKB/TrEMBL
    A0A2I3S1J7, A0A2J8JTP1, A0A6D2XG40

  21. XM_009450305.5 → XP_009448580.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    See identical proteins and their annotated locations for XP_009448580.1

    UniProtKB/TrEMBL
    A0A2I3TX17, A0A2J8JTQ8, A0A6D2XBG6, K7BB57
    Related
    ENSPTRP00000093796.1
    Conserved Domains (4) summary
    pfam08080
    Location:255 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
Nucleotide Protein
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