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CANX calnexin [ Pan troglodytes (chimpanzee) ]

Gene ID: 462330, updated on 19-Mar-2021

Summary

Official Symbol
CANXprovided by VGNC
Official Full Name
calnexinprovided by VGNC
Primary source
VGNC:VGNC:3927
Locus tag
CK820_G0044504
See related
Ensembl:ENSPTRG00000017621
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See CANX in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (157623924..157675845)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 5 NC_006472.4 (180238832..180290761)

Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein FLJ35723 Neighboring gene uncharacterized LOC107974954 Neighboring gene high mobility group protein B3-like Neighboring gene chibby family member 3 Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene uncharacterized LOC104006663 Neighboring gene leukotriene C4 synthase

Genomic regions, transcripts, and products

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

    Range
    157623924..157675845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016954431.1XP_016809920.1  calnexin isoform X2

    UniProtKB/TrEMBL
    H2QS56
    Conserved Domains (1) summary
    pfam00262
    Location:71440
    Calreticulin; Calreticulin family
  2. XM_016954429.1XP_016809918.1  calnexin isoform X1

  3. XM_518152.6XP_518152.2  calnexin isoform X2

    See identical proteins and their annotated locations for XP_518152.2

    UniProtKB/TrEMBL
    H2QS56
    Conserved Domains (1) summary
    pfam00262
    Location:71440
    Calreticulin; Calreticulin family
  4. XM_001151242.4XP_001151242.1  calnexin isoform X2

    See identical proteins and their annotated locations for XP_001151242.1

    UniProtKB/TrEMBL
    H2QS56
    Related
    ENSPTRP00000030101.2, ENSPTRT00000032576.3
    Conserved Domains (1) summary
    pfam00262
    Location:71440
    Calreticulin; Calreticulin family
  5. XM_009450313.3XP_009448588.1  calnexin isoform X3

    Conserved Domains (1) summary
    pfam00262
    Location:125494
    Calreticulin; Calreticulin family
  6. XM_024356877.1XP_024212645.1  calnexin isoform X3

    Conserved Domains (1) summary
    pfam00262
    Location:125494
    Calreticulin; Calreticulin family
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