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ZHX1 zinc fingers and homeoboxes 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464368, updated on 3-Apr-2024

Summary

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Official Symbol
ZHX1provided by VGNC
Official Full Name
zinc fingers and homeoboxes 1provided by VGNC
Primary source
VGNC:VGNC:762
Locus tag
CK820_G0002244
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (133589075..133615233, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (138177978..138203935, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107976434 Neighboring gene family with sequence similarity 83 member A Neighboring gene chromosome 8 C8orf76 homolog Neighboring gene ubiquitin-ribosomal protein eL40 fusion protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene peroxisomal multifunctional enzyme type 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene ATPase family AAA domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc fingers and homeoboxes protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081484.1 → NP_001074953.1  zinc fingers and homeoboxes protein 1

    See identical proteins and their annotated locations for NP_001074953.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ977385
    UniProtKB/Swiss-Prot
    A2T771
    UniProtKB/TrEMBL
    A0A2J8PNL9, A0A2K6HS90, A0A663D9C0, K7BWC4
    Conserved Domains (3) summary
    smart00389
    Location:665 → 716
    HOX; Homeodomain
    cd00086
    Location:468 → 523
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:785 → 821
    Homez; Homeodomain leucine-zipper encoding, Homez

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    133589075..133615233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063816026.1 → XP_063672096.1  zinc fingers and homeoboxes protein 1 isoform X1

    UniProtKB/Swiss-Prot
    A2T771
    UniProtKB/TrEMBL
    A0A2J8PNL9, A0A663D9C0, K7BWC4

  2. XM_016958911.4 → XP_016814400.1  zinc fingers and homeoboxes protein 1 isoform X1

    UniProtKB/Swiss-Prot
    A2T771
    UniProtKB/TrEMBL
    A0A2J8PNL9, A0A2K6HS90, A0A663D9C0, K7BWC4
    Conserved Domains (3) summary
    smart00389
    Location:665 → 716
    HOX; Homeodomain
    cd00086
    Location:468 → 523
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:785 → 821
    Homez; Homeodomain leucine-zipper encoding, Homez

  3. XM_054656401.2 → XP_054512376.1  zinc fingers and homeoboxes protein 1 isoform X1

    UniProtKB/Swiss-Prot
    A2T771
    UniProtKB/TrEMBL
    A0A2J8PNL9, A0A663D9C0, K7BWC4

  4. XM_009455844.5 → XP_009454119.1  zinc fingers and homeoboxes protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009454119.1

    UniProtKB/Swiss-Prot
    A2T771
    UniProtKB/TrEMBL
    A0A2J8PNL9, A0A2K6HS90, A0A663D9C0, K7BWC4
    Conserved Domains (3) summary
    smart00389
    Location:665 → 716
    HOX; Homeodomain
    cd00086
    Location:468 → 523
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:785 → 821
    Homez; Homeodomain leucine-zipper encoding, Homez
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A2T771.1 GenPept UniProtKB/Swiss-Prot:A2T771

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