ATAD2 ATPase family AAA domain containing 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ATAD2provided by VGNC
Official Full Name: ATPase family AAA domain containing 2provided by VGNC
Primary source: VGNC:VGNC:10212
Locus tag: CK820_G0002247
See related: Ensembl:ENSPTRG00000020551
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	7	NC_072405.2 (133658605..133755061, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	8	NC_072406.1 (138247514..138343921, complement)

Chromosome 7 - NC_072405.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH77936 (e-PCR)
- UniSTS:45896

D8S1689 (e-PCR)
- UniSTS:154250

RH80997 (e-PCR)
- UniSTS:84107

WI-20906 (e-PCR)
- UniSTS:4329

RH66014 (e-PCR)
- UniSTS:60157

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed
enables chromatin binding	IEA Inferred from Electronic Annotation more info	PubMed
enables histone binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in positive regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ATPase family AAA domain-containing protein 2

Names: two AAA domain containing protein

XP_001148894.3

EC 3.6.1.3

XP_016815310.3

EC 3.6.1.3

XP_054512971.1

EC 3.6.1.3

XP_054512972.1

EC 3.6.1.3

XP_054512973.1

EC 3.6.1.3

XP_054512974.1

EC 3.6.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

133658605..133755061 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054656998.2 → XP_054512973.1 ATPase family AAA domain-containing protein 2 isoform X5
XM_054656999.2 → XP_054512974.1 ATPase family AAA domain-containing protein 2 isoform X5
XM_016959821.4 → XP_016815310.3 ATPase family AAA domain-containing protein 2 isoform X4
XM_001148894.7 → XP_001148894.3 ATPase family AAA domain-containing protein 2 isoform X3
XM_054656997.2 → XP_054512972.1 ATPase family AAA domain-containing protein 2 isoform X2
XM_054656996.2 → XP_054512971.1 ATPase family AAA domain-containing protein 2 isoform X1