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LCN2 lipocalin 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464764, updated on 29-Mar-2024

Summary

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Official Symbol
LCN2provided by VGNC
Official Full Name
lipocalin 2provided by VGNC
Primary source
VGNC:VGNC:4777
Locus tag
CK820_G0012270
See related
Ensembl:ENSPTRG00000021412
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LCN2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (10299714..10303701, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (108565023..108569010)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene dynamin 1 Neighboring gene microRNA mir-199b Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene bublin coiled coil protein Neighboring gene prostaglandin E synthase 2 Neighboring gene solute carrier family 25 member 25 Neighboring gene uncharacterized LOC134807628

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutrophil gelatinase-associated lipocalin
Names
lipocalin 2 (oncogene 24p3)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    10299714..10303701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_520287.7 → XP_520287.1  neutrophil gelatinase-associated lipocalin

    UniProtKB/TrEMBL
    A0A2I3S5J7, A0A2J8NBF8, A0A2J8NBI1, A0A6D2XTJ4, A0A6D2Y400, H2R697
    Conserved Domains (1) summary
    pfam00061
    Location:49 → 193
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family
Nucleotide Protein
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