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ATP11C ATPase phospholipid transporting 11C [ Pan troglodytes (chimpanzee) ]

Gene ID: 465889, updated on 3-Apr-2024

Summary

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Official Symbol
ATP11Cprovided by VGNC
Official Full Name
ATPase phospholipid transporting 11Cprovided by VGNC
Primary source
VGNC:VGNC:7635
Locus tag
CK820_G0053423
See related
Ensembl:ENSPTRG00000022333
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
36
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (137193099..137399146, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (137189168..137394782, complement)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene coagulation factor IX Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene small nucleolar RNA U13 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene microRNA mir-505 Neighboring gene chromosome X CXorf66 homolog Neighboring gene uncharacterized LOC107971050

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid-transporting ATPase IG
Names
ATPase, class VI, type 11C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    137193099..137399146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063804128.1 → XP_063660198.1  phospholipid-transporting ATPase IG isoform X13

  2. XM_054676238.2 → XP_054532213.1  phospholipid-transporting ATPase IG isoform X7

    UniProtKB/TrEMBL
    A0A2I3RN10

  3. XM_063804121.1 → XP_063660191.1  phospholipid-transporting ATPase IG isoform X2

    UniProtKB/TrEMBL
    A0A2I3RPK8

  4. XM_063804123.1 → XP_063660193.1  phospholipid-transporting ATPase IG isoform X4

  5. XM_063804127.1 → XP_063660197.1  phospholipid-transporting ATPase IG isoform X13

  6. XM_063804126.1 → XP_063660196.1  phospholipid-transporting ATPase IG isoform X12

  7. XM_063804122.1 → XP_063660192.1  phospholipid-transporting ATPase IG isoform X2

    UniProtKB/TrEMBL
    A0A2I3RPK8

  8. XM_063804130.1 → XP_063660200.1  phospholipid-transporting ATPase IG isoform X17

  9. XM_054676240.2 → XP_054532215.2  phospholipid-transporting ATPase IG isoform X16

  10. XM_016944309.4 → XP_016799798.1  phospholipid-transporting ATPase IG isoform X7

    UniProtKB/TrEMBL
    A0A2I3RN10, A0A2J8IT73
    Related
    ENSPTRP00000065722.1

  11. XM_063804125.1 → XP_063660195.1  phospholipid-transporting ATPase IG isoform X11

  12. XM_063804124.1 → XP_063660194.1  phospholipid-transporting ATPase IG isoform X8

  13. XM_016944308.4 → XP_016799797.1  phospholipid-transporting ATPase IG isoform X5

    UniProtKB/TrEMBL
    A0A2I3RA51, A0A2I3STZ7
    Related
    ENSPTRP00000061506.1

  14. XM_024353212.3 → XP_024208980.1  phospholipid-transporting ATPase IG isoform X6

    UniProtKB/TrEMBL
    A0A2J8IT68, A0A2J8IT73
    Conserved Domains (2) summary
    pfam16212
    Location:865 → 1092
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cd02073
    Location:45 → 977
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  15. XM_063804120.1 → XP_063660190.1  phospholipid-transporting ATPase IG isoform X1

    UniProtKB/TrEMBL
    A0A2J8IT63, A0A6D2WXP4, H2QZ68

  16. XM_024353210.3 → XP_024208978.1  phospholipid-transporting ATPase IG isoform X3

    UniProtKB/TrEMBL
    A0A2I3RUC7
    Conserved Domains (2) summary
    pfam16212
    Location:865 → 1092
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cd02073
    Location:45 → 977
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  17. XM_024353213.3 → XP_024208981.1  phospholipid-transporting ATPase IG isoform X9

    UniProtKB/TrEMBL
    A0A2I3RUC7
    Conserved Domains (2) summary
    pfam16212
    Location:865 → 1092
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cd02073
    Location:45 → 977
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  18. XM_024353215.3 → XP_024208983.1  phospholipid-transporting ATPase IG isoform X14

    UniProtKB/TrEMBL
    A0A2I3STZ7
    Conserved Domains (2) summary
    pfam16212
    Location:816 → 1043
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cd02073
    Location:45 → 928
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  19. XM_024353214.3 → XP_024208982.1  phospholipid-transporting ATPase IG isoform X10

    UniProtKB/TrEMBL
    A0A2I3STZ7
    Conserved Domains (2) summary
    pfam16212
    Location:841 → 1068
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cd02073
    Location:45 → 953
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  20. XM_063804129.1 → XP_063660199.1  phospholipid-transporting ATPase IG isoform X15

Nucleotide Protein
Heading Accession and Version

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