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ASCL3 achaete-scute family bHLH transcription factor 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466903, updated on 3-Apr-2024

Summary

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Official Symbol
ASCL3provided by VGNC
Official Full Name
achaete-scute family bHLH transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:11262
Locus tag
CK820_G0005819
See related
Ensembl:ENSPTRG00000003339
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (13083064..13083757, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (12959608..12961836, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene A-kinase interacting protein 1 Neighboring gene chromosome 9 C11orf16 homolog Neighboring gene TMEM9 domain family member B Neighboring gene nuclear receptor interacting protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 3
Names
achaete-scute complex homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    13083064..13083757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063782767.1 → XP_063638837.1  achaete-scute homolog 3

    UniProtKB/TrEMBL
    A0A2J8P5U7, A0A6D2XBQ5, H2Q354
Nucleotide Protein
Heading Accession and Version

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