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OTUD4 OTU deubiquitinase 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466922, updated on 19-Mar-2021

Summary

Official Symbol
OTUD4provided by VGNC
Official Full Name
OTU deubiquitinase 4provided by VGNC
Primary source
VGNC:VGNC:655
Locus tag
CK820_G0016837
See related
Ensembl:ENSPTRG00000016482
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See OTUD4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 4 NC_036883.1 (143181149..143227923, complement)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 4 NC_006471.4 (148837983..148884735, complement)

Chromosome 4 - NC_036883.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104006229 Neighboring gene anaphase promoting complex subunit 10 Neighboring gene ATP binding cassette subfamily E member 1 Neighboring gene uncharacterized LOC107974431 Neighboring gene uncharacterized LOC107974432 Neighboring gene uncharacterized LOC107974116

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
OTU domain-containing protein 4
Names
OTU domain containing 4
XP_016807778.1
XP_016807780.1
XP_016807781.1
XP_016807782.1
XP_016807783.1
XP_016807784.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036883.1 Reference Clint_PTRv2 Primary Assembly

    Range
    143181149..143227923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016952293.2XP_016807782.1  OTU domain-containing protein 4 isoform X4

  2. XM_016952292.2XP_016807781.1  OTU domain-containing protein 4 isoform X3

    Related
    ENSPTRP00000028295.4
    Conserved Domains (2) summary
    cl19932
    Location:42121
    OTU; OTU-like cysteine protease
    cl26464
    Location:543886
    Atrophin-1; Atrophin-1 family
  3. XM_016952291.2XP_016807780.1  OTU domain-containing protein 4 isoform X2

  4. XM_016952289.2XP_016807778.1  OTU domain-containing protein 4 isoform X1

  5. XM_016952295.2XP_016807784.1  OTU domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    H2QQ87
    Conserved Domains (2) summary
    cl19932
    Location:356
    OTU; OTU-like cysteine protease
    cl26464
    Location:478821
    Atrophin-1; Atrophin-1 family
  6. XM_016952294.2XP_016807783.1  OTU domain-containing protein 4 isoform X5

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