TNFRSF1A TNF receptor superfamily member 1A [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: TNFRSF1Aprovided by VGNC
Official Full Name: TNF receptor superfamily member 1Aprovided by VGNC
Primary source: VGNC:VGNC:52079
Locus tag: CK820_G0048179
See related: Ensembl:ENSPTRG00000004570
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	10	NC_072408.2 (13509999..13523896, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	12	NC_072410.1 (12159439..12172775, complement)

Chromosome 10 - NC_072408.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

GDB:214852 (e-PCR)
- UniSTS:156197

RH75052 (e-PCR)
- UniSTS:91966

WI-18755 (e-PCR)
- UniSTS:57193

STS-M58286 (e-PCR)
- UniSTS:34937

D12S889 (e-PCR)
- UniSTS:149919

GDB:384764 (e-PCR)
- UniSTS:157097

G15949 (e-PCR)
- UniSTS:44467

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables tumor necrosis factor binding	IEA Inferred from Electronic Annotation more info	PubMed
enables tumor necrosis factor receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in inflammatory response	IEA Inferred from Electronic Annotation more info	PubMed
involved_in prostaglandin metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in tumor necrosis factor-mediated signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane raft	IEA Inferred from Electronic Annotation more info	PubMed
part_of receptor complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: tumor necrosis factor receptor superfamily member 1A

Names: tumor necrosis factor receptor 1; tumor necrosis factor receptor superfamily, member 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

13509999..13523896 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009424666.4 → XP_009422941.3 tumor necrosis factor receptor superfamily member 1A isoform X1

UniProtKB/TrEMBL

A0A2J8JF06, A0A6D2WZC8, K7BID5
XM_054663988.2 → XP_054519963.2 tumor necrosis factor receptor superfamily member 1A isoform X2