PSMA3 proteasome 20S subunit alpha 3 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PSMA3provided by VGNC
Official Full Name: proteasome 20S subunit alpha 3provided by VGNC
Primary source: VGNC:VGNC:3337
Locus tag: CK820_G0002547
See related: Ensembl:ENSPTRG00000006390
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	15	NC_072413.2 (56234516..56261846)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	14	NC_072412.1 (49505667..49532996)

Chromosome 15 - NC_072413.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH69274 (e-PCR)
- UniSTS:22103

PMC310823P11 (e-PCR)
- UniSTS:272743

SHGC-64015 (e-PCR)
- UniSTS:53611

RH17928 (e-PCR)
- UniSTS:51626

SHGC-34645 (e-PCR)
- UniSTS:21203

SHGC-32634 (e-PCR)
- UniSTS:21204

SHGC-30923 (e-PCR)
- UniSTS:4835

RH78140 (e-PCR)
- UniSTS:42225

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in proteasomal protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of proteasome core complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of proteasome core complex, alpha-subunit complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in synapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: proteasome subunit alpha type-3

Names: proteasome (prosome, macropain) subunit, alpha type, 3; proteasome alpha 3 subunit; proteasome subunit alpha 3

XP_001164848.1

EC 3.4.25.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

56234516..56261846

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001164848.6 → XP_001164848.1 proteasome subunit alpha type-3

See identical proteins and their annotated locations for XP_001164848.1

UniProtKB/TrEMBL

A0A2I3TEP6, A0A2J8PHW1, A0A6D2W2P9, H2Q8D7

Related

ENSPTRP00000010840.3

Conserved Domains (1) summary

cd03751
Location:5 → 217

proteasome_alpha_type_3; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...