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TTPA alpha tocopherol transfer protein [ Pan troglodytes (chimpanzee) ]

Gene ID: 472778, updated on 29-Mar-2024

Summary

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Official Symbol
TTPAprovided by VGNC
Official Full Name
alpha tocopherol transfer proteinprovided by VGNC
Primary source
VGNC:VGNC:10488
Locus tag
CK820_G0034484
See related
Ensembl:ENSPTRG00000020294
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (71709384..71736117, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (76717740..76744473, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene sodium/potassium transporting ATPase interacting 3 Neighboring gene SRSF protein kinase 2-like Neighboring gene TAR DNA-binding protein 43-like Neighboring gene gamma-glutamyl hydrolase Neighboring gene YTH N6-methyladenosine RNA binding protein F3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vitamin E binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vitamin E metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vitamin transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tocopherol transfer protein
Names
tocopherol (alpha) transfer protein (ataxia (Friedreich-like) with vitamin E deficiency)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    71709384..71736117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054656785.1 → XP_054512760.1  alpha-tocopherol transfer protein isoform X3

  2. XM_054656786.2 → XP_054512761.1  alpha-tocopherol transfer protein isoform X4

  3. XM_054656784.1 → XP_054512759.1  alpha-tocopherol transfer protein isoform X2

  4. XM_528150.8 → XP_528150.2  alpha-tocopherol transfer protein isoform X1

    UniProtKB/TrEMBL
    A0A2J8KZJ5, A0A6D2XL94, H2QW83
    Related
    ENSPTRP00000034737.4
    Conserved Domains (2) summary
    smart01100
    Location:40 → 73
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99 → 248
    CRAL_TRIO; CRAL/TRIO domain

  5. XM_054656787.2 → XP_054512762.1  alpha-tocopherol transfer protein isoform X5

Nucleotide Protein
Heading Accession and Version

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