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AIRE autoimmune regulator [ Pan troglodytes (chimpanzee) ]

Gene ID: 474134, updated on 19-Mar-2021

Summary

Official Symbol
AIREprovided by VGNC
Official Full Name
autoimmune regulatorprovided by VGNC
Primary source
VGNC:VGNC:1159
Locus tag
CK820_G0022943
See related
Ensembl:ENSPTRG00000013974
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 21
Exon count:
14
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 21 NC_036900.1 (30744867..30758319)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 21 NC_006488.4 (30834980..30848430)

Chromosome 21 - NC_036900.1Genomic Context describing neighboring genes Neighboring gene inducible T cell costimulator ligand Neighboring gene DNA methyltransferase 3 like Neighboring gene phosphofructokinase, liver type Neighboring gene cilia and flagella associated protein 410

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
autoimmune regulator
Names
autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
autoimmune regulator AIRE

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036900.1 Reference Clint_PTRv2 Primary Assembly

    Range
    30744867..30758319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016938640.2XP_016794129.1  autoimmune regulator isoform X2

  2. XM_531580.6XP_531580.1  autoimmune regulator isoform X1

    UniProtKB/TrEMBL
    H2QL43
    Related
    ENSPTRP00000024049.4
    Conserved Domains (5) summary
    cd15539
    Location:298340
    PHD1_AIRE; PHD finger 1 found in autoimmune regulator (AIRE)
    cd15540
    Location:433475
    PHD2_AIRE; PHD finger 2 found in autoimmune regulator (AIRE)
    pfam03172
    Location:16103
    HSR; HSR domain
    cl02536
    Location:197257
    SAND; SAND domain
    cl02608
    Location:318373
    BAH; BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in ...