U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UTP3 UTP3 small subunit processome component [ Canis lupus familiaris (dog) ]

Gene ID: 475167, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
UTP3provided by VGNC
Official Full Name
UTP3 small subunit processome componentprovided by VGNC
Primary source
VGNC:VGNC:48213
See related
Ensembl:ENSCAFG00845010847
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 13
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (60800059..60802648)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (59728581..59731163)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (61053932..61056514)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (60415248..60417829)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (59906920..59909501)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene joining chain of multimeric IgA and IgM Neighboring gene uncharacterized LOC119874469 Neighboring gene RUN and FYVE domain containing 3 Neighboring gene uncharacterized LOC106559653 Neighboring gene G-rich RNA sequence binding factor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
something about silencing protein 10
Names
UTP3, small subunit processome component homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    60800059..60802648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685841.1 → XP_038541769.1  something about silencing protein 10

    UniProtKB/TrEMBL
    A0A8C0LXR5, A0A8I3N5W3
    Related
    ENSCAFP00845014947.1, ENSCAFT00845019135.1
    Conserved Domains (2) summary
    pfam04000
    Location:229 → 309
    Sas10_Utp3; Sas10/Utp3/C1D family
    pfam09368
    Location:407 → 477
    Sas10; Sas10 C-terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    60415248..60417829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493980.1 → XP_038349908.1  something about silencing protein 10

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    59906920..59909501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620208.1 → XP_038476136.1  something about silencing protein 10

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    61053932..61056514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556271.1 → XP_038412199.1  something about silencing protein 10

    UniProtKB/TrEMBL
    A0A8C0LXR5, A0A8C0QBL1, A0A8P0N5W0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    59728581..59731163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014118841.3 → XP_013974316.1  something about silencing protein 10

    UniProtKB/TrEMBL
    A0A8C0LXR5, A0A8C0QBL1, A0A8P0N5W0
    Conserved Domains (2) summary
    pfam04000
    Location:227 → 306
    Sas10_Utp3; Sas10/Utp3/C1D family
    pfam09368
    Location:405 → 475
    Sas10; Sas10 C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous