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EMILIN1 elastin microfibril interfacer 1 [ Canis lupus familiaris (dog) ]

Gene ID: 475696, updated on 5-Mar-2024

Summary

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Official Symbol
EMILIN1provided by VGNC
Official Full Name
elastin microfibril interfacer 1provided by VGNC
Primary source
VGNC:VGNC:40343
See related
Ensembl:ENSCAFG00845005994
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (21391307..21399069)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (20963506..20971268)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (21136118..21143825)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (21078565..21086326)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (21089650..21097411)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene AGBL carboxypeptidase 5 Neighboring gene oligosaccharyltransferase complex subunit 4, non-catalytic Neighboring gene ketohexokinase Neighboring gene cell growth regulator with EF-hand domain 1 Neighboring gene abhydrolase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix constituent conferring elasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EMILIN-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    21391307..21399069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690987.1 → XP_038546915.1  EMILIN-1

    UniProtKB/TrEMBL
    A0A8I3MYH1, A0A8I3RT07, A0A8P0N7C3, A0A8P0T345
    Related
    ENSCAFP00845008269.1, ENSCAFT00845010614.1
    Conserved Domains (3) summary
    TIGR02168
    Location:643 → 812
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam07546
    Location:58 → 127
    EMI; EMI domain
    cl23878
    Location:874 → 1015
    C1q; C1q domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    21078565..21086326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038498492.1 → XP_038354420.1  EMILIN-1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    21089650..21097411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038625088.1 → XP_038481016.1  EMILIN-1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    21136118..21143825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038561041.1 → XP_038416969.1  EMILIN-1

    UniProtKB/TrEMBL
    A0A8I3MYH1, A0A8I3RT07, A0A8P0N7C3, A0A8P0T345
    Conserved Domains (3) summary
    TIGR02168
    Location:643 → 812
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam07546
    Location:58 → 127
    EMI; EMI domain
    cl23878
    Location:874 → 1015
    C1q; C1q domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    20963506..20971268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003432153.5 → XP_003432201.2  EMILIN-1

    UniProtKB/TrEMBL
    A0A8I3MYH1, A0A8I3RT07, A0A8P0N7C3, A0A8P0T345
    Conserved Domains (3) summary
    TIGR02168
    Location:643 → 812
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam07546
    Location:58 → 127
    EMI; EMI domain
    cl23878
    Location:874 → 1015
    C1q; C1q domain
Nucleotide Protein
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