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PLEKHG6 pleckstrin homology and RhoGEF domain containing G6 [ Canis lupus familiaris (dog) ]

Gene ID: 477717, updated on 28-Sep-2021

Summary

Official Symbol
PLEKHG6provided by VGNC
Official Full Name
pleckstrin homology and RhoGEF domain containing G6provided by VGNC
Primary source
VGNC:VGNC:44681
See related
EnsemblRapid:ENSCAFG00845029568
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See PLEKHG6 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (39011002..39026871, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (7943742..7959595)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (7422587..7438302)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (38883535..38899388, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (38925020..38940874, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 27 NC_006609.3 (38654879..38670553, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit alpha Neighboring gene TNF receptor superfamily member 1A Neighboring gene uncharacterized LOC119866330 Neighboring gene uncharacterized LOC111092895 Neighboring gene CD9 molecule

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 6; pleckstrin homology domain-containing family G member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    39011002..39026871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439223.1XP_038295151.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  2. XM_038439221.1XP_038295149.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  3. XM_038439222.1XP_038295150.1  pleckstrin homology domain-containing family G member 6

    Related
    ENSCAFP00845041078.1, ENSCAFT00845052365.1
    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    38883535..38899388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513886.1XP_038369814.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  2. XM_038513884.1XP_038369812.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  3. XM_038513885.1XP_038369813.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    38925020..38940874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641730.1XP_038497658.1  pleckstrin homology domain-containing family G member 6

  2. XM_038641728.1XP_038497656.1  pleckstrin homology domain-containing family G member 6

  3. XM_038641729.1XP_038497657.1  pleckstrin homology domain-containing family G member 6

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    7422587..7438302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576556.1XP_038432484.1  LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7943742..7959595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038459734.1XP_038315662.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  2. XM_038459736.1XP_038315664.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
  3. XM_534913.6XP_534913.2  pleckstrin homology domain-containing family G member 6

    UniProtKB/TrEMBL
    E2R8T3
    Conserved Domains (2) summary
    cd13244
    Location:408506
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:165351
    RhoGEF; RhoGEF domain
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