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ANKRD1 ankyrin repeat domain 1 [ Canis lupus familiaris (dog) ]

Gene ID: 477764, updated on 5-Mar-2024

Summary

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Official Symbol
ANKRD1provided by VGNC
Official Full Name
ankyrin repeat domain 1provided by VGNC
Primary source
VGNC:VGNC:37880
See related
Ensembl:ENSCAFG00845029233
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (5789401..5799972, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (5736579..5745849, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (5750959..5760237, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (5546460..5555716, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (5585466..5594725, complement)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 7 Neighboring gene ribonuclease P/MRP subunit p30 Neighboring gene uncharacterized LOC106557927 Neighboring gene uncharacterized LOC119866562 Neighboring gene ADP-ribose pyrophosphatase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    5789401..5799972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439917.1 → XP_038295845.1  ankyrin repeat domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0NKU1, A0A8C0NNT6, A0A8C0TTN8, A0A8I3PZJ8
    Related
    ENSCAFP00845040590.1, ENSCAFT00845051734.1
    Conserved Domains (2) summary
    sd00045
    Location:188 → 216
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190 → 282
    Ank_2; Ankyrin repeats (3 copies)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    5546460..5555716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038514529.1 → XP_038370457.1  ankyrin repeat domain-containing protein 1

    Conserved Domains (2) summary
    sd00045
    Location:188 → 216
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190 → 282
    Ank_2; Ankyrin repeats (3 copies)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    5585466..5594725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038642343.1 → XP_038498271.1  ankyrin repeat domain-containing protein 1

    Conserved Domains (2) summary
    sd00045
    Location:188 → 216
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190 → 282
    Ank_2; Ankyrin repeats (3 copies)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    5750959..5760237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038578177.1 → XP_038434105.1  ankyrin repeat domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0NKU1, A0A8C0NNT6, A0A8C0TTN8, A0A8I3PZJ8
    Conserved Domains (2) summary
    sd00045
    Location:188 → 216
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190 → 282
    Ank_2; Ankyrin repeats (3 copies)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    5736579..5745849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005637531.2 → XP_005637588.1  ankyrin repeat domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0NKU1, A0A8C0NNT6, A0A8C0TTN8, A0A8I3PZJ8
    Conserved Domains (2) summary
    sd00045
    Location:188 → 216
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190 → 282
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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