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EXOC6 exocyst complex component 6 [ Canis lupus familiaris (dog) ]

Gene ID: 477771, updated on 5-Mar-2024

Summary

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Official Symbol
EXOC6provided by VGNC
Official Full Name
exocyst complex component 6provided by VGNC
Primary source
VGNC:VGNC:40516
See related
Ensembl:ENSCAFG00845017746
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
SEC15A; SEC15L; SEC15L1
Orthologs
human mouse all
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Genomic context

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See EXOC6 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
28
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (7450430..7674414)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (7383691..7590914)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (7386421..7593646)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (7187448..7394618)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (7222047..7431904)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106557939 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene peroxisomal trans-2-enoyl-CoA reductase-like Neighboring gene chromobox protein homolog 3-like Neighboring gene uncharacterized LOC106557965 Neighboring gene uncharacterized LOC111093028 Neighboring gene cell division cycle 42 (GTP binding protein, 25kDa) pseudogene Neighboring gene cytochrome P450, family 26, subfamily C, polypeptide 1 Neighboring gene cytochrome P450 family 26 subfamily A member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A molecular network for de novo generation of the apical surface and lumen. Bryant DM, et al. Nat Cell Biol, 2010 Nov. PMID 20890297, Free PMC Article
  2. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Lindblad-Toh K, et al. Nature, 2005 Dec 8. PMID 16341006

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle tethering involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exocyst complex component 6
Names
Exocyst complex component Sec15A
SEC15-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001313786.2 → NP_001300715.2  exocyst complex component 6

    Status: VALIDATED

    Source sequence(s)
    DN372325, JAAUVH010000374
    UniProtKB/TrEMBL
    A0A8C0RJB6
    Related
    ENSCAFP00845024782.1, ENSCAFT00845031662.1
    Conserved Domains (1) summary
    pfam04091
    Location:455 → 761
    Sec15; Exocyst complex subunit Sec15-like

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    7450430..7674414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439640.1 → XP_038295568.1  exocyst complex component 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RJ41, A0A8I3P1E1, A0A8P0PHY5
    Related
    ENSCAFP00845024627.1, ENSCAFT00845031449.1
    Conserved Domains (1) summary
    pfam04091
    Location:450 → 756
    Sec15; Exocyst complex subunit Sec15-like

  2. XM_038439639.1 → XP_038295567.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RJ41, A0A8C0TFL9, A0A8P0PNR8
    Conserved Domains (1) summary
    pfam04091
    Location:462 → 768
    Sec15; Exocyst complex subunit Sec15-like

  3. XM_038439638.1 → XP_038295566.1  exocyst complex component 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RJB6
    Conserved Domains (1) summary
    pfam04091
    Location:476 → 782
    Sec15; Exocyst complex subunit Sec15-like

  4. XM_038439641.1 → XP_038295569.1  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0RJB6
    Conserved Domains (1) summary
    pfam04091
    Location:408 → 714
    Sec15; Exocyst complex subunit Sec15-like

  5. XM_038439642.1 → XP_038295570.1  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0RJB6
    Conserved Domains (1) summary
    pfam04091
    Location:408 → 714
    Sec15; Exocyst complex subunit Sec15-like

  6. XM_038439643.1 → XP_038295571.1  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0RJB6
    Conserved Domains (1) summary
    pfam04091
    Location:408 → 714
    Sec15; Exocyst complex subunit Sec15-like

  7. XM_038439645.1 → XP_038295573.1  exocyst complex component 6 isoform X6

    UniProtKB/Swiss-Prot
    E2R766
    Conserved Domains (1) summary
    pfam04091
    Location:303 → 609
    Sec15; Exocyst complex subunit Sec15-like

  8. XM_038439644.1 → XP_038295572.1  exocyst complex component 6 isoform X5

    UniProtKB/Swiss-Prot
    E2R766
    Conserved Domains (1) summary
    pfam04091
    Location:311 → 617
    Sec15; Exocyst complex subunit Sec15-like

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    7187448..7394618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    7222047..7431904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    7386421..7593646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7383691..7590914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E2R766.1 GenPept UniProtKB/Swiss-Prot:E2R766

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