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TPM2 tropomyosin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 481598, updated on 23-Dec-2021

Summary

Official Symbol
TPM2provided by VGNC
Official Full Name
tropomyosin 2provided by VGNC
Primary source
VGNC:VGNC:47742
See related
Ensembl:ENSCAFG00845009024
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See TPM2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (53277326..53284901, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (50779956..50787531, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (52507526..52515101, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (51821901..51829478, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (51805386..51812960, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 11 NC_006593.3 (52212372..52219947, complement)

Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 39 Neighboring gene coiled-coil domain containing 107 Neighboring gene carbonic anhydrase 9 Neighboring gene talin 1 Neighboring gene uncharacterized LOC119873942 Neighboring gene cAMP responsive element binding protein 3 Neighboring gene glucosylceramidase beta 2

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
tropomyosin beta chain
Names
tropomyosin 2 (beta)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051815.1 Reference ROS_Cfam_1.0

    Range
    53277326..53284901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038682106.1XP_038538034.1  tropomyosin beta chain isoform X3

    Related
    ENSCAFP00845012385.1, ENSCAFT00845015916.1
    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  2. XM_038682104.1XP_038538032.1  tropomyosin beta chain isoform X1

    Related
    ENSCAFP00845012425.1, ENSCAFT00845015972.1
    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  3. XM_038682107.1XP_038538035.1  tropomyosin beta chain isoform X4

    Related
    ENSCAFP00845012604.1, ENSCAFT00845016203.1
    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  4. XM_038682105.1XP_038538033.1  tropomyosin beta chain isoform X2

    Related
    ENSCAFP00845012466.1, ENSCAFT00845016031.1
    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049271.1 Alternate UMICH_Zoey_3.1

    Range
    51821901..51829478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038490658.1XP_038346586.1  tropomyosin beta chain isoform X3

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  2. XM_038490655.1XP_038346583.1  tropomyosin beta chain isoform X1

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  3. XM_038490659.1XP_038346587.1  tropomyosin beta chain isoform X4

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  4. XM_038490657.1XP_038346585.1  tropomyosin beta chain isoform X2

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

    Range
    51805386..51812960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038616637.1XP_038472565.1  tropomyosin beta chain isoform X3

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  2. XM_038616635.1XP_038472563.1  tropomyosin beta chain isoform X1

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  3. XM_038616638.1XP_038472566.1  tropomyosin beta chain isoform X4

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  4. XM_038616636.1XP_038472564.1  tropomyosin beta chain isoform X2

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

    Range
    52507526..52515101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038552778.1XP_038408706.1  tropomyosin beta chain isoform X3

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  2. XM_038552776.1XP_038408704.1  tropomyosin beta chain isoform X1

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  3. XM_038552779.1XP_038408707.1  tropomyosin beta chain isoform X4

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  4. XM_038552777.1XP_038408705.1  tropomyosin beta chain isoform X2

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50779956..50787531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_861479.3XP_866572.1  tropomyosin beta chain isoform X3

    See identical proteins and their annotated locations for XP_866572.1

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  2. XM_538720.4XP_538720.2  tropomyosin beta chain isoform X1

    See identical proteins and their annotated locations for XP_538720.2

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  3. XM_847850.4XP_852943.1  tropomyosin beta chain isoform X4

    See identical proteins and their annotated locations for XP_852943.1

    UniProtKB/TrEMBL
    E2RAH4
    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
  4. XM_861343.4XP_866436.1  tropomyosin beta chain isoform X2

    See identical proteins and their annotated locations for XP_866436.1

    Conserved Domains (1) summary
    pfam00261
    Location:48282
    Tropomyosin
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