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CLDN24 claudin 24 [ Canis lupus familiaris (dog) ]

Gene ID: 482918, updated on 22-Jan-2024

Summary

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Gene symbol
CLDN24
Gene description
claudin 24
See related
Ensembl:ENSCAFG00845016547
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (49233822..49234484)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (47443238..47443900)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (47950543..47951205)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (47195512..47196172)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (47809900..47810562)

Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene uncharacterized LOC111090183 Neighboring gene claudin-22 Neighboring gene WW and C2 domain containing 2 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative claudin-24; putative claudin-24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051820.1 Reference ROS_Cfam_1.0

    Range
    49233822..49234484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690271.1 → XP_038546199.1  putative claudin-24

    UniProtKB/TrEMBL
    A0A8C0JNQ1, A0A8C0N3V6, A0A8C0Q249, A0A8I3P0C6
    Related
    ENSCAFP00845023069.1, ENSCAFT00845029343.1
    Conserved Domains (1) summary
    cl21598
    Location:10 → 172
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049276.1 Alternate UMICH_Zoey_3.1

    Range
    47195512..47196172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038497979.1 → XP_038353907.1  LOW QUALITY PROTEIN: putative claudin-24

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

    Range
    47809900..47810562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038624502.1 → XP_038480430.1  putative claudin-24

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

    Range
    47950543..47951205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038560453.1 → XP_038416381.1  putative claudin-24

    UniProtKB/TrEMBL
    A0A8C0JNQ1, A0A8C0N3V6, A0A8C0Q249, A0A8I3P0C6
    Conserved Domains (1) summary
    cl21598
    Location:10 → 172
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47443238..47443900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_540033.6 → XP_540033.2  putative claudin-24

    UniProtKB/TrEMBL
    A0A8C0JNQ1, A0A8C0N3V6, A0A8C0Q249, A0A8I3P0C6
    Conserved Domains (1) summary
    cl21598
    Location:10 → 172
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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