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PNOC prepronociceptin [ Canis lupus familiaris (dog) ]

Gene ID: 486095, updated on 5-Mar-2024

Summary

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Official Symbol
PNOCprovided by VGNC
Official Full Name
prepronociceptinprovided by VGNC
Primary source
VGNC:VGNC:44750
See related
Ensembl:ENSCAFG00845008618
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (29382377..29404891, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (29873540..29896041, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (29393029..29415545, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (29342437..29364950, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (29226990..29249199, complement)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene F-box protein 16 Neighboring gene zinc finger protein 395 Neighboring gene uncharacterized LOC119865846 Neighboring gene uncharacterized LOC111092477

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular phylogenetics and the origins of placental mammals. Murphy WJ, et al. Nature, 2001 Feb 1. PMID 11214319

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables opioid receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nociceptin; prepronociceptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    29382377..29404891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434628.1 → XP_038290556.1  prepronociceptin isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  2. XM_038434629.1 → XP_038290557.1  prepronociceptin isoform X2

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  3. XM_038434627.1 → XP_038290555.1  prepronociceptin isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  4. XM_038434630.1 → XP_038290558.1  prepronociceptin isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPW1, A0A8C0QZP8, A0A8C0SZ80, A0A8I3MYM0
    Related
    ENSCAFP00845011781.1, ENSCAFT00845015175.1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    29342437..29364950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511038.1 → XP_038366966.1  prepronociceptin isoform X1

    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  2. XM_038511039.1 → XP_038366967.1  prepronociceptin isoform X2

    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  3. XM_038511037.1 → XP_038366965.1  prepronociceptin isoform X1

    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  4. XM_038511040.1 → XP_038366968.1  prepronociceptin isoform X3

    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    29226990..29249199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637312.1 → XP_038493240.1  prepronociceptin isoform X1

  2. XM_038637314.1 → XP_038493242.1  prepronociceptin isoform X2

  3. XM_038637311.1 → XP_038493239.1  prepronociceptin isoform X1

  4. XM_038637315.1 → XP_038493243.1  prepronociceptin isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    29393029..29415545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573069.1 → XP_038428997.1  prepronociceptin isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  2. XM_038573070.1 → XP_038428998.1  prepronociceptin isoform X2

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  3. XM_038573068.1 → XP_038428996.1  prepronociceptin isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  4. XM_038573071.1 → XP_038428999.1  prepronociceptin isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPW1, A0A8C0QZP8, A0A8C0SZ80, A0A8I3MYM0
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    29873540..29896041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005635670.4 → XP_005635727.1  prepronociceptin isoform X1

    See identical proteins and their annotated locations for XP_005635727.1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  2. XM_005635671.4 → XP_005635728.1  prepronociceptin isoform X2

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  3. XM_005635669.4 → XP_005635726.1  prepronociceptin isoform X1

    See identical proteins and their annotated locations for XP_005635726.1

    UniProtKB/TrEMBL
    A0A8C0PPW1
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

  4. XM_543221.7 → XP_543221.2  prepronociceptin isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPW1, A0A8C0QZP8, A0A8C0SZ80, A0A8I3MYM0
    Conserved Domains (1) summary
    pfam01160
    Location:21 → 66
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide
Nucleotide Protein
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