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ATG101 autophagy related 101 [ Canis lupus familiaris (dog) ]

Gene ID: 486535, updated on 5-Mar-2024

Summary

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Official Symbol
ATG101provided by VGNC
Official Full Name
autophagy related 101provided by VGNC
Primary source
VGNC:VGNC:38215
See related
Ensembl:ENSCAFG00845026809
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
C27H12orf44
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2928791..2935881, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43317316..43324391)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (43715530..43722606)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2945425..2950072, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2931788..2938961, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 80 Neighboring gene small integral membrane protein 41 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene trafficking regulator and scaffold protein tamalin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 101; LOW QUALITY PROTEIN: autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2928791..2935881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438121.1 → XP_038294049.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Related
    ENSCAFP00845037083.1, ENSCAFT00845047250.1
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  2. XM_038438122.1 → XP_038294050.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2945425..2950072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512816.1 → XP_038368744.1  LOW QUALITY PROTEIN: autophagy-related protein 101

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2931788..2938961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640578.1 → XP_038496506.1  autophagy-related protein 101

    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  2. XM_038640579.1 → XP_038496507.1  autophagy-related protein 101

    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    43715530..43722606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577724.1 → XP_038433652.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  2. XM_038577725.1 → XP_038433653.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43317316..43324391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038460134.1 → XP_038316062.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101

  2. XM_038460135.1 → XP_038316063.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101
Nucleotide Protein
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