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SLC2A13 solute carrier family 2 member 13 [ Canis lupus familiaris (dog) ]

Gene ID: 486609, updated on 5-Mar-2024

Summary

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Official Symbol
SLC2A13provided by VGNC
Official Full Name
solute carrier family 2 member 13provided by VGNC
Primary source
VGNC:VGNC:46340
See related
Ensembl:ENSCAFG00845030718
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (13709817..14065777)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (32543604..32917842, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (32688067..33043995, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (13502093..13875296)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (13557171..13912943)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat kinase 2 Neighboring gene uncharacterized LOC111092839 Neighboring gene elongation factor 1-gamma-like Neighboring gene U6 spliceosomal RNA Neighboring gene regulator of DNA class I crossover intermediates 1 Neighboring gene ATP binding cassette subfamily D member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables myo-inositol:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proton myo-inositol cotransporter; LOW QUALITY PROTEIN: proton myo-inositol cotransporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    13709817..14065777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438516.1 → XP_038294444.1  proton myo-inositol cotransporter

    UniProtKB/TrEMBL
    A0A8C0TQ38, A0A8I3S7S0, A0A8P0PBS2
    Related
    ENSCAFP00845042876.1, ENSCAFT00845054543.1
    Conserved Domains (1) summary
    cd17360
    Location:91 → 600
    MFS_HMIT_like; H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    13502093..13875296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513196.1 → XP_038369124.1  LOW QUALITY PROTEIN: proton myo-inositol cotransporter

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    13557171..13912943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640979.1 → XP_038496907.1  proton myo-inositol cotransporter

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    32688067..33043995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577277.1 → XP_038433205.1  proton myo-inositol cotransporter

    UniProtKB/TrEMBL
    A0A8C0TQ38, A0A8I3S7S0, A0A8P0PBS2
    Conserved Domains (1) summary
    cd17360
    Location:91 → 600
    MFS_HMIT_like; H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32543604..32917842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_543735.8 → XP_543735.5  proton myo-inositol cotransporter

    UniProtKB/TrEMBL
    A0A8C0P9B1, A0A8C0TQ38, A0A8P0PBS2
    Conserved Domains (1) summary
    cd17360
    Location:94 → 603
    MFS_HMIT_like; H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily
Nucleotide Protein
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