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DMBT1 deleted in malignant brain tumors 1 [ Canis lupus familiaris (dog) ]

Gene ID: 486922, updated on 5-Mar-2024

Summary

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Official Symbol
DMBT1provided by VGNC
Official Full Name
deleted in malignant brain tumors 1provided by VGNC
Primary source
VGNC:VGNC:39996
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
65
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (32734599..32843241)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (32273452..32352858)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (32492566..32643099)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (32266372..32367335)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (32288134..32391575)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A1 Neighboring gene HtrA serine peptidase 1 Neighboring gene uncharacterized LOC119866609 Neighboring gene chromosome 28 C10orf120 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deleted in malignant brain tumors 1 protein; LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    32734599..32843241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439657.1 → XP_038295585.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein isoform X1

    Conserved Domains (3) summary
    smart00202
    Location:592 → 692
    SR; Scavenger receptor Cys-rich
    smart00241
    Location:2645 → 2889
    ZP; Zona pellucida (ZP) domain
    cd00041
    Location:2526 → 2634
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    32266372..32367335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038515407.1 → XP_038371335.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    32288134..32391575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038643226.1 → XP_038499154.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    32492566..32643099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038579001.1 → XP_038434929.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein isoform X4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32273452..32352858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038460329.1 → XP_038316257.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein isoform X5

    Conserved Domains (3) summary
    smart00202
    Location:482 → 582
    SR; Scavenger receptor Cys-rich
    smart00241
    Location:1988 → 2232
    ZP; Zona pellucida (ZP) domain
    cd00041
    Location:1869 → 1977
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Nucleotide Protein
Heading Accession and Version

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