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LOC487083 lysozyme-like protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 487083, updated on 22-Jan-2024

Summary

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Gene symbol
LOC487083
Gene description
lysozyme-like protein 1
See related
Ensembl:ENSCAFG00845011606
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
LYZD1; LYZL1; LYZL2
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Genomic context

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See LOC487083 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (15152776..15170530, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (14407481..14425174, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (14756648..14774348, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (14596809..14614500, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (14483684..14501394, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 8 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene uncharacterized LOC106560017 Neighboring gene uncharacterized LOC111091389

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme-like protein 1
Names
lysozyme D1
lysozyme-like 1
lysozyme-like 2
XP_005617115.1
XP_022262842.1
XP_038325138.1
XP_038325139.1
XP_038385850.1
XP_038385851.1
XP_038450119.1
XP_038450120.1
XP_038514175.1
XP_038514177.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    15152776..15170530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038658247.1 → XP_038514175.1  lysozyme-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PNJ7, A0A8I3NE26
    Related
    ENSCAFP00845016138.1, ENSCAFT00845020573.1
    Conserved Domains (1) summary
    cd16897
    Location:20 → 126
    LYZ_C; C-type lysozyme

  2. XM_038658249.1 → XP_038514177.1  lysozyme-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LSI4, A0A8C0MSQ6, E2RR82
    Related
    ENSCAFP00845016163.1, ENSCAFT00845020605.1
    Conserved Domains (1) summary
    cd16897
    Location:20 → 145
    LYZ_C; C-type lysozyme

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    14596809..14614500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038469210.1 → XP_038325138.1  lysozyme-like protein 1 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:20 → 126
    LYZ_C; C-type lysozyme

  2. XM_038469211.1 → XP_038325139.1  lysozyme-like protein 1 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:20 → 145
    LYZ_C; C-type lysozyme

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    14483684..14501394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594191.1 → XP_038450119.1  lysozyme-like protein 1 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:20 → 126
    LYZ_C; C-type lysozyme

  2. XM_038594192.1 → XP_038450120.1  lysozyme-like protein 1 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:20 → 145
    LYZ_C; C-type lysozyme

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    14756648..14774348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038529922.1 → XP_038385850.1  lysozyme-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PNJ7, A0A8I3NE26
    Conserved Domains (1) summary
    cd16897
    Location:20 → 126
    LYZ_C; C-type lysozyme

  2. XM_038529923.1 → XP_038385851.1  lysozyme-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LSI4, A0A8C0MSQ6, E2RR82
    Conserved Domains (1) summary
    cd16897
    Location:20 → 145
    LYZ_C; C-type lysozyme

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14407481..14425174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022407134.2 → XP_022262842.1  lysozyme-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PNJ7, A0A8I3NE26
    Conserved Domains (1) summary
    cd16897
    Location:20 → 126
    LYZ_C; C-type lysozyme

  2. XM_005617058.2 → XP_005617115.1  lysozyme-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005617115.1

    UniProtKB/TrEMBL
    A0A8C0LSI4, A0A8C0MSQ6, E2RR82
    Conserved Domains (1) summary
    cd16897
    Location:20 → 145
    LYZ_C; C-type lysozyme
Nucleotide Protein
Heading Accession and Version

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