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SCN7A sodium voltage-gated channel alpha subunit 7 [ Canis lupus familiaris (dog) ]

Gene ID: 488382, updated on 28-Sep-2021

Summary

Official Symbol
SCN7Aprovided by VGNC
Official Full Name
sodium voltage-gated channel alpha subunit 7provided by VGNC
Primary source
VGNC:VGNC:45922
See related
EnsemblRapid:ENSCAFG00845018286
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See SCN7A in Genome Data Viewer
Location:
chromosome: 36
Exon count:
27
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 36 NC_051840.1 (11615133..11691208, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 36 NC_006618.4 (11625452..11635876, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 36 NC_049257.1 (11782607..11864741, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 36 NC_049296.1 (11697209..11773082, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 36 NC_049777.1 (11669022..11752078, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 36 NC_006618.3 (11482840..11590394, complement)

Chromosome 36 - NC_051840.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 9 Neighboring gene uncharacterized LOC119867818 Neighboring gene uncharacterized LOC102153897 Neighboring gene uncharacterized LOC119867820 Neighboring gene uncharacterized LOC119867821 Neighboring gene tetraspanin-6-like Neighboring gene MICOS complex subunit MIC26-like

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
sodium channel protein type 7 subunit alpha
Names
sodium channel voltage-gated type VII alpha
sodium channel, voltage-gated, type VII, alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051840.1 Reference ROS_Cfam_1.0

    Range
    11615133..11691208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038446947.1XP_038302875.1  sodium channel protein type 7 subunit alpha isoform X1

    Related
    ENSCAFP00845025494.1, ENSCAFT00845032596.1
    Conserved Domains (3) summary
    cd13433
    Location:11981249
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9361201
    Ion_trans; Ion transport protein
    pfam06512
    Location:744882
    Na_trans_assoc; Sodium ion transport-associated
  2. XM_038446948.1XP_038302876.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated
  3. XM_038446949.1XP_038302877.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049296.1 Alternate UMICH_Zoey_3.1

    Range
    11697209..11773082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521019.1XP_038376947.1  sodium channel protein type 7 subunit alpha isoform X1

    Conserved Domains (3) summary
    cd13433
    Location:11981249
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9361201
    Ion_trans; Ion transport protein
    pfam06512
    Location:744882
    Na_trans_assoc; Sodium ion transport-associated
  2. XM_038521020.1XP_038376948.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated
  3. XM_038521021.1XP_038376949.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049777.1 Alternate UNSW_CanFamBas_1.0

    Range
    11669022..11752078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038649136.1XP_038505064.1  sodium channel protein type 7 subunit alpha isoform X1

    Conserved Domains (3) summary
    cd13433
    Location:11981249
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9361201
    Ion_trans; Ion transport protein
    pfam06512
    Location:744882
    Na_trans_assoc; Sodium ion transport-associated
  2. XM_038649137.1XP_038505065.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated
  3. XM_038649138.1XP_038505066.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049257.1 Alternate UU_Cfam_GSD_1.0

    Range
    11782607..11864741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038584717.1XP_038440645.1  sodium channel protein type 7 subunit alpha isoform X1

    Conserved Domains (3) summary
    cd13433
    Location:11981249
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9361201
    Ion_trans; Ion transport protein
    pfam06512
    Location:744882
    Na_trans_assoc; Sodium ion transport-associated
  2. XM_038584718.1XP_038440646.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated
  3. XM_038584719.1XP_038440647.1  sodium channel protein type 7 subunit alpha isoform X2

    Conserved Domains (3) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:736874
    Na_trans_assoc; Sodium ion transport-associated

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006618.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11625452..11635876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463460.1XP_038319388.1  sodium channel protein type 7 subunit alpha isoform X3

    Conserved Domains (2) summary
    cd13433
    Location:153204
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:210455
    Ion_trans; Ion transport protein
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