Format

Send to:

Choose Destination

SFXN1 sideroflexin 1 [ Canis lupus familiaris (dog) ]

Gene ID: 489109, updated on 28-Sep-2021

Summary

Official Symbol
SFXN1provided by VGNC
Official Full Name
sideroflexin 1provided by VGNC
Primary source
VGNC:VGNC:46087
See related
EnsemblRapid:ENSCAFG00845000413
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SFXN1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (37851035..37891568, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (37431872..37472432, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (38373604..38414131, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (37675678..37716181, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (37863646..37904164, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 4 NC_006586.3 (37485360..37517743, complement)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095711 Neighboring gene U6 spliceosomal RNA Neighboring gene dopamine receptor D1 Neighboring gene lymphokine-activated killer T-cell-originated protein kinase-like

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    37851035..37891568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038663332.1XP_038519260.1  sideroflexin-1 isoform X3

    Related
    ENSCAFP00845000459.1, ENSCAFT00845000648.1
    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  2. XM_038663327.1XP_038519255.1  sideroflexin-1 isoform X2

    Related
    ENSCAFP00845000469.1, ENSCAFT00845000658.1
    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  3. XM_038663329.1XP_038519257.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  4. XM_038663325.1XP_038519253.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  5. XM_038663324.1XP_038519252.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  6. XM_038663326.1XP_038519254.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  7. XM_038663330.1XP_038519258.1  sideroflexin-1 isoform X4

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  8. XM_038663331.1XP_038519259.1  sideroflexin-1 isoform X5

    Conserved Domains (1) summary
    pfam03820
    Location:10241
    Mtc; Tricarboxylate carrier

RNA

  1. XR_005425774.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    37675678..37716181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038473646.1XP_038329574.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  2. XM_038473643.1XP_038329571.1  sideroflexin-1 isoform X2

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  3. XM_038473644.1XP_038329572.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  4. XM_038473641.1XP_038329569.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  5. XM_038473642.1XP_038329570.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  6. XM_038473645.1XP_038329573.1  sideroflexin-1 isoform X4

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier

RNA

  1. XR_005324370.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    37863646..37904164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038599026.1XP_038454954.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  2. XM_038599022.1XP_038454950.1  sideroflexin-1 isoform X2

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  3. XM_038599023.1XP_038454951.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  4. XM_038599020.1XP_038454948.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  5. XM_038599019.1XP_038454947.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  6. XM_038599021.1XP_038454949.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  7. XM_038599024.1XP_038454952.1  sideroflexin-1 isoform X4

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  8. XM_038599025.1XP_038454953.1  sideroflexin-1 isoform X5

    Conserved Domains (1) summary
    pfam03820
    Location:10241
    Mtc; Tricarboxylate carrier

RNA

  1. XR_005392662.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    38373604..38414131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038534722.1XP_038390650.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  2. XM_038534719.1XP_038390647.1  sideroflexin-1 isoform X2

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  3. XM_038534720.1XP_038390648.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  4. XM_038534717.1XP_038390645.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  5. XM_038534718.1XP_038390646.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  6. XM_038534721.1XP_038390649.1  sideroflexin-1 isoform X4

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier

RNA

  1. XR_005358153.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    37431872..37472432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494557.1XP_038350485.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  2. XM_038494550.1XP_038350478.1  sideroflexin-1 isoform X2

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier
  3. XM_022417684.1XP_022273392.1  sideroflexin-1 isoform X3

    Conserved Domains (1) summary
    pfam03820
    Location:10322
    Mtc; Tricarboxylate carrier
  4. XM_038494537.1XP_038350465.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  5. XM_038494547.1XP_038350475.1  sideroflexin-1 isoform X1

    Conserved Domains (1) summary
    pfam03820
    Location:10264
    Mtc; Tricarboxylate carrier
  6. XM_038494556.1XP_038350484.1  sideroflexin-1 isoform X4

    Conserved Domains (1) summary
    pfam03820
    Location:10261
    Mtc; Tricarboxylate carrier

RNA

  1. XR_005335611.1 RNA Sequence

Support Center