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OR4D2C olfactory receptor family 4 subfamily D member 2C [ Canis lupus familiaris (dog) ]

Gene ID: 491108, updated on 22-Jan-2024

Summary

Official Symbol
OR4D2Cprovided by VGNC
Official Full Name
olfactory receptor family 4 subfamily D member 2Cprovided by VGNC
Primary source
VGNC:VGNC:84796
Gene type
protein coding
RefSeq status
INFERRED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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Genomic context

Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (33647079..33648023)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (32077498..32078442)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (32810192..32811136)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (32431826..32432770)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (32715089..32716033)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily D member 1 Neighboring gene uncharacterized LOC111097543 Neighboring gene olfactory receptor family 4 subfamily D member 2 Neighboring gene eosinophil peroxidase Neighboring gene MKS transition zone complex subunit 1 Neighboring gene uncharacterized LOC111097404 Neighboring gene lactoperoxidase

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
olfactory receptor family 4 subfamily D member 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001388810.1NP_001375739.1  olfactory receptor family 4 subfamily D member 2C

    Status: INFERRED

    Source sequence(s)
    JAAUVH010000313
    UniProtKB/TrEMBL
    A0A8C0MWJ1, A0A8I3PBE2
    Conserved Domains (1) summary
    cd15936
    Location:35291
    7tmA_OR4D-like; olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    33647079..33648023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    32431826..32432770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    32715089..32716033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    32810192..32811136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32077498..32078442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)