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CXCR3 C-X-C motif chemokine receptor 3 [ Bos taurus (cattle) ]

Gene ID: 497018, updated on 24-Jul-2021

Summary

Official Symbol
CXCR3provided by VGNC
Official Full Name
C-X-C motif chemokine receptor 3provided by VGNC
Primary source
VGNC:VGNC:27855
See related
BGD:BT15926
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See CXCR3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) X NC_037357.1 (79061841..79062940)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) X AC_000187.1 (84355316..84356415)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein CXorf49 homolog Neighboring gene uncharacterized protein CXorf49 homolog Neighboring gene germ cell nuclear acidic peptidase Neighboring gene O-linked N-acetylglucosamine (GlcNAc) transferase Neighboring gene suppressor of cytokine signaling 6-like

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables C-X-C chemokine binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables C-X-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in chemokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of execution phase of apoptosis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of angiogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of cell population proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of chemotaxis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of release of sequestered calcium ion into cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of leukocyte migration IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
C-X-C chemokine receptor type 3
Names
CXC-R3
CXCR-3
IP-10 receptor
chemokine (C-X-C motif) receptor 3
interferon-inducible protein 10 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001011673.1NP_001011673.1  C-X-C chemokine receptor type 3

    See identical proteins and their annotated locations for NP_001011673.1

    Status: PROVISIONAL

    Source sequence(s)
    AY834254
    UniProtKB/Swiss-Prot
    Q5MD61
    Conserved Domains (1) summary
    pfam00001
    Location:68316
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    79061841..79062940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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