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Heatr6 HEAT repeat containing 6 [ Rattus norvegicus (Norway rat) ]

Gene ID: 497972, updated on 13-Apr-2024

Summary

Official Symbol
Heatr6provided by RGD
Official Full Name
HEAT repeat containing 6provided by RGD
Primary source
RGD:1566204
See related
Ensembl:ENSRNOG00000002542 AllianceGenome:RGD:1566204
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566204
Summary
Orthologous to human HEATR6 (HEAT repeat containing 6). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 56.3), Adrenal (RPKM 48.9) and 9 other tissues See more
Orthologs
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Genomic context

See Heatr6 in Genome Data Viewer
Location:
10q26
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (69132532..69161334)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (68635048..68665445)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (71054344..71083229)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene anosmin 1, pseudogene 1 Neighboring gene WAP four-disulfide core domain 21 Neighboring gene HNF1 homeobox B Neighboring gene uncharacterized LOC134480708 Neighboring gene DExD-box helicase 52

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
HEAT repeat-containing protein 6
Names
2700008B19Rik-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079897.2NP_001073366.2  HEAT repeat-containing protein 6

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000010
    Related
    ENSRNOP00000003492.4, ENSRNOT00000003492.6

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    69132532..69161334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010055225.1 RNA Sequence

  2. XR_005489915.2 RNA Sequence