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Bbln bublin coiled coil protein [ Rattus norvegicus (Norway rat) ]

Gene ID: 499780, updated on 2-Oct-2021

Summary

Official Symbol
Bblnprovided by RGD
Official Full Name
bublin coiled coil proteinprovided by RGD
Primary source
RGD:1561113
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561113
Expression
Biased expression in Brain (RPKM 217.3), Adrenal (RPKM 200.1) and 9 other tissues See more
Orthologs
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Genomic context

See Bbln in Genome Data Viewer
Location:
3p12
Exon count:
2
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (15674577..15677393, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (11408076..11410907, complement)

Chromosome 3 - NC_051338.1Genomic Context describing neighboring genes Neighboring gene dynamin 1 Neighboring gene U1 spliceosomal RNA Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene lipocalin 2 Neighboring gene uncharacterized LOC120101523 Neighboring gene prostaglandin E synthase 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

General protein information

Preferred Names
UPF0184 protein C9orf16 homolog; bublin coiled coil protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051338.1 Reference mRatBN7.2 Primary Assembly

    Range
    15674577..15677393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_575113.8XP_575113.2  UPF0184 protein C9orf16 homolog

    See identical proteins and their annotated locations for XP_575113.2

    UniProtKB/TrEMBL
    D3ZBT2
    Conserved Domains (1) summary
    pfam03670
    Location:183
    UPF0184; Uncharacterized protein family (UPF0184)
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