U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rps3l1 ribosomal protein S3 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 499803, updated on 11-Apr-2024

Summary

Official Symbol
Rps3l1provided by RGD
Official Full Name
ribosomal protein S3 like 1provided by RGD
Primary source
RGD:1560831
See related
Ensembl:ENSRNOG00000007605 AllianceGenome:RGD:1560831
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560831
Summary
Predicted to enable DNA binding activity; RNA binding activity; and class I DNA-(apurinic or apyrimidinic site) endonuclease activity. Predicted to be involved in several processes, including DNA repair; regulation of translation; and translation. Predicted to be located in mitochondrial inner membrane and spindle. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
3q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (71967699..71968537, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (51559683..51560522, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (52997847..52998669, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 9 Neighboring gene histone deacetylase 1-like Neighboring gene sodium voltage-gated channel alpha subunit 7 Neighboring gene ribosomal protein L9, pseudogene 11 Neighboring gene ribosomal protein S7, pseudogene 5

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables class I DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of translation IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small ribosomal subunit protein uS3-like
Names
40S ribosomal protein S3-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    71967699..71968537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039106339.2XP_038962267.1  small ribosomal subunit protein uS3-like

    UniProtKB/TrEMBL
    A0A8L2QCG7, D3ZVH2
    Related
    ENSRNOP00000009988.1
    Conserved Domains (1) summary
    PTZ00084
    Location:4216
    PTZ00084; 40S ribosomal protein S3; Provisional