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Jkampl JNK1/MAPK8 associated membrane protein like [ Rattus norvegicus (Norway rat) ]

Gene ID: 500204, updated on 29-Feb-2024

Summary

Official Symbol
Jkamplprovided by RGD
Official Full Name
JNK1/MAPK8 associated membrane protein likeprovided by RGD
Primary source
RGD:1562515
See related
Ensembl:ENSRNOG00000024604 AllianceGenome:RGD:1562515
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1562515
Summary
Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be integral component of membrane. Orthologous to human JKAMP (JNK1/MAPK8 associated membrane protein). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Jkampl in Genome Data Viewer
Location:
4q33
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (107078531..107079631, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (105520442..105521542, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (101392229..101393329, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha Neighboring gene olfactory receptor family 6 subfamily C member 235, pseudogene 1 Neighboring gene polypyrimidine tract binding protein 1, pseudogene 3 Neighboring gene uncharacterized LOC108350866

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in ERAD pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to unfolded protein IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein LOC500204

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109242.1NP_001102712.1  uncharacterized protein LOC500204

    See identical proteins and their annotated locations for NP_001102712.1

    Status: PREDICTED

    Source sequence(s)
    CH473957
    UniProtKB/TrEMBL
    A6IAE5, D4A0V1
    Related
    ENSRNOP00000007636.1, ENSRNOT00000007636.4
    Conserved Domains (1) summary
    pfam05571
    Location:3294
    DUF766; Protein of unknown function (DUF766)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    107078531..107079631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)