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Nxpe1 neurexophilin and PC-esterase domain family, member 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500992, updated on 3-Apr-2024

Summary

Official Symbol
Nxpe1provided by RGD
Official Full Name
neurexophilin and PC-esterase domain family, member 1provided by RGD
Primary source
RGD:1566243
See related
Ensembl:ENSRNOG00000027730 AllianceGenome:RGD:1566243
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566243
Summary
Orthologous to human NXPE1 (neurexophilin and PC-esterase domain family member 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Spleen (RPKM 76.3), Heart (RPKM 75.5) and 9 other tissues See more
Orthologs
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Genomic context

Location:
8q23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (57642308..57670280)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (48749250..48773762)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (52741293..52775469)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480045 Neighboring gene neurexophilin and PC-esterase domain family member 4 Neighboring gene neurexophilin and PC-esterase domain family, member 2 Neighboring gene RNA exonuclease 2 Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134635.1NP_001128107.1  NXPE family member 1

    See identical proteins and their annotated locations for NP_001128107.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473975
    UniProtKB/TrEMBL
    A6J492, F1M016
    Related
    ENSRNOP00000051143.4, ENSRNOT00000047264.5
    Conserved Domains (1) summary
    pfam06312
    Location:76214
    Neurexophilin; Neurexophilin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    57642308..57670280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017595842.3XP_017451331.1  NXPE family member 1 isoform X1

    UniProtKB/TrEMBL
    M0RBP3
    Conserved Domains (1) summary
    pfam06312
    Location:138276
    Neurexophilin; Neurexophilin
  2. XM_006243018.5XP_006243080.1  NXPE family member 1 isoform X1

    See identical proteins and their annotated locations for XP_006243080.1

    UniProtKB/TrEMBL
    M0RBP3
    Related
    ENSRNOP00000066987.2
    Conserved Domains (1) summary
    pfam06312
    Location:138276
    Neurexophilin; Neurexophilin
  3. XM_006243019.5XP_006243081.1  NXPE family member 1 isoform X1

    See identical proteins and their annotated locations for XP_006243081.1

    UniProtKB/TrEMBL
    M0RBP3
    Conserved Domains (1) summary
    pfam06312
    Location:138276
    Neurexophilin; Neurexophilin
  4. XM_063265986.1XP_063122056.1  NXPE family member 1 isoform X1

    UniProtKB/TrEMBL
    M0RBP3