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CG4440 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 50458, updated on 10-May-2024

Summary

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Official Symbol
CG4440provided by FlyBase
Primary source
FLYBASE:FBgn0040984
Locus tag
Dmel_CG4440
See related
AllianceGenome:FB:FBgn0040984
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE16123; Dmel\CG4440
Summary
Is expressed in several structures, including dorsal ectoderm; extended germ band embryo; larval ventral nerve cord; presumptive embryonic/larval system; and yolk nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See CG4440 in Genome Data Viewer
Location:
35F1-35F1; 2-52 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (16329925..16330521)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (16329925..16330521)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene fizzy Neighboring gene cactus Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis. Hooper SD, et al. Mol Syst Biol, 2007. PMID 17224916, Free PMC Article
  2. The Genetic Architecture of Natural Variation in Recombination Rate in Drosophila melanogaster. Hunter CM, et al. PLoS Genet, 2016 Apr. PMID 27035832, Free PMC Article
  3. Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis. Zúñiga A, et al. BMC Biol, 2009 Sep 22. PMID 19772636, Free PMC Article
  4. Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations. Winbush A, et al. Genome Biol Evol, 2021 Jan 7. PMID 33247719, Free PMC Article
  5. Developmental control of nuclear morphogenesis and anchoring by charleston, identified in a functional genomic screen of Drosophila cellularisation. Pilot F, et al. Development, 2006 Feb. PMID 16421189

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4440-PA
CG4440-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    16329925..16330521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273568.1 → NP_001260497.1  uncharacterized protein Dmel_CG4440, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260497.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJL3

  2. NM_144320.3 → NP_652577.1  uncharacterized protein Dmel_CG4440, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652577.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJL3
    Related
    FBpp0080393
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VJL3 Q9VJL3

Gene LinkOut

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